ID A0A0G4IHQ4_PLABS Unreviewed; 583 AA.
AC A0A0G4IHQ4;
DT 16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT 16-SEP-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=Succinate-CoA ligase subunit beta {ECO:0000256|RuleBase:RU361258};
DE EC=6.2.1.- {ECO:0000256|RuleBase:RU361258};
DE Flags: Fragment;
GN ORFNames=PBRA_000500 {ECO:0000313|EMBL:CEO94714.1};
OS Plasmodiophora brassicae (Clubroot disease agent).
OC Eukaryota; Sar; Rhizaria; Endomyxa; Phytomyxea; Plasmodiophorida;
OC Plasmodiophoridae; Plasmodiophora.
OX NCBI_TaxID=37360 {ECO:0000313|EMBL:CEO94714.1, ECO:0000313|Proteomes:UP000039324};
RN [1] {ECO:0000313|EMBL:CEO94714.1, ECO:0000313|Proteomes:UP000039324}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E3 {ECO:0000313|EMBL:CEO94714.1};
RA Chooi Y.-H.;
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + CoA + succinate = ADP + phosphate + succinyl-CoA;
CC Xref=Rhea:RHEA:17661, ChEBI:CHEBI:30031, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:57287, ChEBI:CHEBI:57292,
CC ChEBI:CHEBI:456216; EC=6.2.1.5;
CC Evidence={ECO:0000256|ARBA:ARBA00043683};
CC -!- PATHWAY: Carbohydrate metabolism; tricarboxylic acid cycle; succinate
CC from succinyl-CoA (ligase route): step 1/1.
CC {ECO:0000256|ARBA:ARBA00005064}.
CC -!- SUBUNIT: Heterodimer of an alpha and a beta subunit.
CC {ECO:0000256|RuleBase:RU361258}.
CC -!- SIMILARITY: Belongs to the succinate/malate CoA ligase beta subunit
CC family. {ECO:0000256|RuleBase:RU361258}.
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DR EMBL; CDSF01000001; CEO94714.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0G4IHQ4; -.
DR STRING; 37360.A0A0G4IHQ4; -.
DR EnsemblProtists; CEO94714; CEO94714; PBRA_000500.
DR OMA; CLQVEIN; -.
DR OrthoDB; 1384037at2759; -.
DR UniPathway; UPA00223; UER00999.
DR Proteomes; UP000039324; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.1490.20; ATP-grasp fold, A domain; 1.
DR Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 1.
DR Gene3D; 3.40.50.261; Succinyl-CoA synthetase domains; 1.
DR HAMAP; MF_00558; Succ_CoA_beta; 1.
DR InterPro; IPR013650; ATP-grasp_succ-CoA_synth-type.
DR InterPro; IPR013815; ATP_grasp_subdomain_1.
DR InterPro; IPR017866; Succ-CoA_synthase_bsu_CS.
DR InterPro; IPR005811; SUCC_ACL_C.
DR InterPro; IPR005809; Succ_CoA_ligase-like_bsu.
DR InterPro; IPR016102; Succinyl-CoA_synth-like.
DR NCBIfam; TIGR01016; sucCoAbeta; 1.
DR PANTHER; PTHR11815:SF10; SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA, MITOCHONDRIAL; 1.
DR PANTHER; PTHR11815; SUCCINYL-COA SYNTHETASE BETA CHAIN; 1.
DR Pfam; PF08442; ATP-grasp_2; 1.
DR Pfam; PF00549; Ligase_CoA; 1.
DR SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 1.
DR SUPFAM; SSF52210; Succinyl-CoA synthetase domains; 1.
DR PROSITE; PS01217; SUCCINYL_COA_LIG_3; 1.
PE 3: Inferred from homology;
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000256|RuleBase:RU361258};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU361258};
KW Reference proteome {ECO:0000313|Proteomes:UP000039324}.
FT DOMAIN 172..381
FT /note="ATP-grasp fold succinyl-CoA synthetase-type"
FT /evidence="ECO:0000259|Pfam:PF08442"
FT DOMAIN 441..561
FT /note="ATP-citrate synthase/succinyl-CoA ligase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF00549"
FT REGION 120..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CEO94714.1"
SQ SEQUENCE 583 AA; 63374 MW; 6C38AA3E0DE7CB1E CRC64;
LPSLYMVIVL QPPANACNSA LHDPRLAVEG YLHPVCTFKT VDGVVSSSPD AIRPSRIKVT
QPERNLTGCT TCWLPIVRSG QHEESAKQVV GSSHKNASVW LSSGSGNCLA VCSLNFRSSK
SGAGPGSGRS RHGWGGVHRR SRQMQRAAIR AGRWAVRVRP SQQSGAQVRF LNIHEYLSHD
ILRKFSVPTA NGFPARTPEE AAEAARKIGG KDFVVKAQVL AGGRGKGRFT NGFEGGVHAA
NSPGQVRDLA AKMLGQHLVT KQTDSKGRPV DIVYVVERLF IRRECYFAIL LDRSANGPVL
VASPKGGMDI EKVAAETPDF IFKAAVDDLE AGPTDDQLST LAAGMGFSEE NSLDEAKKVM
SSLYQLFRKT DATLVEINPL CETHDGRVRC TDAKLNFDDN AEYRQKEIFE LRDRKQEDPR
EVMASEYGLN YIGLDGNIGC LVNGAGLAMA TMDIIKLQGG SPANFLDLGG GATERTVTKA
FEILNMDQRV EAILVNIFGG IMKCDVIALG LIAAVTTTDM KKPLVVRLEG TNVDEAKKLI
EDSGLRMMTC DDLEDAARKA VRVAEIVRMA RDVHIDVKFE LPL
//
