ID A0A0G4J5A1_PLABS Unreviewed; 348 AA.
AC A0A0G4J5A1;
DT 16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT 16-SEP-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=Ubiquitin-like domain-containing protein {ECO:0000259|PROSITE:PS50053};
GN ORFNames=PBRA_002644 {ECO:0000313|EMBL:CEP02677.1}, PLBR_LOCUS2018
GN {ECO:0000313|EMBL:SPQ94803.1};
OS Plasmodiophora brassicae (Clubroot disease agent).
OG Mitochondrion {ECO:0000313|EMBL:SPQ94803.1}.
OC Eukaryota; Sar; Rhizaria; Endomyxa; Phytomyxea; Plasmodiophorida;
OC Plasmodiophoridae; Plasmodiophora.
OX NCBI_TaxID=37360 {ECO:0000313|EMBL:CEP02677.1, ECO:0000313|Proteomes:UP000039324};
RN [1] {ECO:0000313|EMBL:CEP02677.1, ECO:0000313|Proteomes:UP000039324}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E3 {ECO:0000313|EMBL:CEP02677.1};
RA Chooi Y.-H.;
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:SPQ94803.1, ECO:0000313|Proteomes:UP000290189}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fogelqvist J.;
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the archaeal Rpo12/eukaryotic RPC10 RNA
CC polymerase subunit family. {ECO:0000256|ARBA:ARBA00025770}.
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DR EMBL; CDSF01000133; CEP02677.1; -; Genomic_DNA.
DR EMBL; OVEO01000003; SPQ94803.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0G4J5A1; -.
DR EnsemblProtists; CEP02677; CEP02677; PBRA_002644.
DR OMA; YMENSRR; -.
DR OrthoDB; 5489148at2759; -.
DR Proteomes; UP000039324; Unassembled WGS sequence.
DR Proteomes; UP000290189; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd17039; Ubl_ubiquitin_like; 2.
DR Gene3D; 2.20.28.30; RNA polymerase ii, chain L; 1.
DR InterPro; IPR006591; RNAP_P/RPABC4.
DR InterPro; IPR039747; RPABC4.
DR InterPro; IPR029040; RPABC4/Spt4.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR12056; DNA-DIRECTED RNA POLYMERASES I, II, AND III; 1.
DR PANTHER; PTHR12056:SF2; GEO11084P1; 1.
DR Pfam; PF03604; DNA_RNApol_7kD; 1.
DR Pfam; PF00240; ubiquitin; 1.
DR SMART; SM00659; RPOLCX; 1.
DR SMART; SM00213; UBQ; 1.
DR SUPFAM; SSF63393; RNA polymerase subunits; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 2.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Mitochondrion {ECO:0000313|EMBL:SPQ94803.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000039324};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 76..140
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 218..296
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
SQ SEQUENCE 348 AA; 39221 MW; 844BD049AF893936 CRC64;
MKVVKVTTDA GRALVVDCAN PDTYCETYGD LWQLLQRQQE LTPDHELVDA NDAPLPLDAP
VQFTGQAAVF IKWNKFDITI VDDAHDNQVI PVSASWTIQR VRKEYEDEIG TVIERLSYKG
SELEDHATLA AYGIGHGAKL ISRIRIVVRD RQCQLEQAQL MYDFSTIFDL KVAFGNSTAR
NAVPGKCSYR GRELADSDTI YQCELGPNSA VDFEASPFPI YVVTANAIVD EDDEERPIEL
TVNDHFTVQM IKELYGIVSG GQALVGEDRL TFDGEILAEN EMIYLRGVKS GSKLYLQRED
IAKATDYECG GCGDVNKIRR RDPIRCRNCG YRVLYKLRTR RPCQYVAR
//
