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Database: UniProt
Entry: A0A0G9F620_LACPN
LinkDB: A0A0G9F620_LACPN
Original site: A0A0G9F620_LACPN 
ID   A0A0G9F620_LACPN        Unreviewed;       188 AA.
AC   A0A0G9F620;
DT   16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT   16-SEP-2015, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:MDG2543125.1};
DE   SubName: Full=Transcriptional regulator, Cro/C1 family {ECO:0000313|EMBL:KEZ12548.1};
DE   SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:KRN35388.1};
GN   ORFNames=AVR83_07275 {ECO:0000313|EMBL:AOB22755.1}, C7M36_01569
GN   {ECO:0000313|EMBL:QHM37294.1}, C7M40_02507
GN   {ECO:0000313|EMBL:QHM50537.1}, IV39_GL001384
GN   {ECO:0000313|EMBL:KRN35388.1}, Lp90_2717
GN   {ECO:0000313|EMBL:KEZ12548.1}, LPJSA22_02840
GN   {ECO:0000313|EMBL:ODO62822.1}, MJ874_04180
GN   {ECO:0000313|EMBL:MDG2543125.1};
OS   Lactiplantibacillus plantarum (Lactobacillus plantarum).
OC   Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Lactiplantibacillus.
OX   NCBI_TaxID=1590 {ECO:0000313|EMBL:KRN35388.1, ECO:0000313|Proteomes:UP000051742};
RN   [1] {ECO:0000313|EMBL:KEZ12548.1, ECO:0000313|Proteomes:UP000028536}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Lp90 {ECO:0000313|EMBL:KEZ12548.1,
RC   ECO:0000313|Proteomes:UP000028536};
RA   Lamontanara A., Caggianiello G., Orru L., Capozzi V., Michelotti V.,
RA   Bayjanov J.R., Renckens B., van Hijum S.A., Cattivelli L., Spano G.;
RT   "Noncontiguous-finished genome sequence of Lactobacillus plantarum strain
RT   Lp90 isolated from Apulian (Italy) wine.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KRN35388.1, ECO:0000313|Proteomes:UP000051742}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 13273 {ECO:0000313|EMBL:KRN35388.1,
RC   ECO:0000313|Proteomes:UP000051742};
RX   PubMed=26415554; DOI=10.1038/ncomms9322;
RA   Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA   Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA   Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA   Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA   de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA   Zhang H., O'Toole P.W.;
RT   "Expanding the biotechnology potential of lactobacilli through comparative
RT   genomics of 213 strains and associated genera.";
RL   Nat. Commun. 6:8322-8322(2015).
RN   [3] {ECO:0000313|EMBL:AOB22755.1, ECO:0000313|Proteomes:UP000093296}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DF {ECO:0000313|EMBL:AOB22755.1,
RC   ECO:0000313|Proteomes:UP000093296};
RA   Petkau K., Fast D., Duggal A., Foley E.;
RT   "Comparative evaluation of the genomes of common bacterial members of the
RT   Drosophila intestinal community.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:ODO62822.1, ECO:0000313|Proteomes:UP000094892}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JSA22 {ECO:0000313|EMBL:ODO62822.1,
RC   ECO:0000313|Proteomes:UP000094892};
RA   Choi H.S.;
RT   "Genome sequencing of Lactobacillus plantarum JSA22, isolated from
RT   fermented soybean paste.";
RL   Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:QHM37294.1, ECO:0000313|Proteomes:UP000464882}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SRCM101167 {ECO:0000313|EMBL:QHM37294.1,
RC   ECO:0000313|Proteomes:UP000464882};
RA   Jeong D.-Y.;
RT   "Lactobacillus plantatrum SRCM101167 having anti-virus activity species
RT   isolated from Korea kimchi.";
RL   Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:QHM50537.1, ECO:0000313|Proteomes:UP000465032}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SRCM101518 {ECO:0000313|EMBL:QHM50537.1,
RC   ECO:0000313|Proteomes:UP000465032};
RA   Jeong D.-Y.;
RT   "Lactobacillus plantatrum SRCM101518 having antimicrbial activity species
RT   isolated from Korea kimchi.";
RL   Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:MDG2543125.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=WUH3 {ECO:0000313|EMBL:MDG2543125.1};
RA   Li H., Guo L., Zhang X., Mu H., Sha S., Lin Y., Hou H., Wang L.;
RT   "Whole-genome sequencing combined with mass spectrometry to identify
RT   bacteriocin and mine silent genes.";
RL   LWT Food Sci. Technol. 169:0-0(2022).
RN   [8] {ECO:0000313|EMBL:MDG2543125.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=WUH3 {ECO:0000313|EMBL:MDG2543125.1};
RA   Guo L.;
RL   Submitted (FEB-2022) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP013753; AOB22755.1; -; Genomic_DNA.
DR   EMBL; JIBX01000027; KEZ12548.1; -; Genomic_DNA.
DR   EMBL; JQAW01000068; KRN35388.1; -; Genomic_DNA.
DR   EMBL; JAKUCW010000010; MDG2543125.1; -; Genomic_DNA.
DR   EMBL; MCOL01000001; ODO62822.1; -; Genomic_DNA.
DR   EMBL; CP028334; QHM37294.1; -; Genomic_DNA.
DR   EMBL; CP028241; QHM50537.1; -; Genomic_DNA.
DR   RefSeq; WP_003643427.1; NZ_WWDF01000003.1.
DR   GeneID; 77216283; -.
DR   PATRIC; fig|1590.142.peg.2822; -.
DR   Proteomes; UP000028536; Unassembled WGS sequence.
DR   Proteomes; UP000051742; Unassembled WGS sequence.
DR   Proteomes; UP000093296; Chromosome.
DR   Proteomes; UP000094892; Unassembled WGS sequence.
DR   Proteomes; UP000464882; Chromosome.
DR   Proteomes; UP000465032; Chromosome.
DR   Proteomes; UP001152506; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   PANTHER; PTHR46558:SF13; HTH-TYPE TRANSCRIPTIONAL REGULATOR IMMR; 1.
DR   PANTHER; PTHR46558; TRACRIPTIONAL REGULATORY PROTEIN-RELATED-RELATED; 1.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        76..98
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        104..122
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        134..152
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          9..63
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   188 AA;  21490 MW;  2A287A02869AEE7D CRC64;
     MGDSIGQRIK AKRLELKLTQ NQVAEKLFVT QQTVARWENG KHTLPVKAVQ DLSELFDVPT
     AYFFGEDQII MRRFNFFAFV GSVFVNFILF WLIAIVLLTV LLTVWGMLGA GLAAPVVIIW
     QFITAAHIFD IGRLMISCGM LLMSLVVIPI AWKITCYIGC ILKAYYRYNV NSIVYEVIPR
     EANDDYRK
//
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