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Entry: A0A0G9HE18_9GAMM
LinkDB: A0A0G9HE18_9GAMM
Original site: A0A0G9HE18_9GAMM 
ID   A0A0G9HE18_9GAMM        Unreviewed;       130 AA.
AC   A0A0G9HE18;
DT   16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT   16-SEP-2015, sequence version 1.
DT   27-MAR-2024, entry version 35.
DE   RecName: Full=Succinate dehydrogenase cytochrome b556 subunit {ECO:0000256|ARBA:ARBA00020076};
GN   ORFNames=BJI69_16710 {ECO:0000313|EMBL:APG05382.1}, Y883_04920
GN   {ECO:0000313|EMBL:KLD68000.1};
OS   Luteibacter rhizovicinus DSM 16549.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC   Rhodanobacteraceae; Luteibacter.
OX   NCBI_TaxID=1440763 {ECO:0000313|EMBL:APG05382.1, ECO:0000313|Proteomes:UP000182987};
RN   [1] {ECO:0000313|EMBL:KLD68000.1, ECO:0000313|Proteomes:UP000035585}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16549 {ECO:0000313|EMBL:KLD68000.1,
RC   ECO:0000313|Proteomes:UP000035585};
RX   PubMed=25481407; DOI=10.1007/s10482-014-0344-8;
RA   Naushad S., Adeolu M., Wong S., Sohail M., Schellhorn H.E., Gupta R.S.;
RT   "A phylogenomic and molecular marker based taxonomic framework for the
RT   order Xanthomonadales: proposal to transfer the families Algiphilaceae and
RT   Solimonadaceae to the order Nevskiales ord. nov. and to create a new family
RT   within the order Xanthomonadales, the family Rhodanobacteraceae fam. nov.,
RT   containing the genus Rhodanobacter and its closest relatives.";
RL   Antonie Van Leeuwenhoek 107:467-485(2015).
RN   [2] {ECO:0000313|EMBL:APG05382.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=LJ96 {ECO:0000313|EMBL:APG05382.1};
RX   PubMed=28123952;
RA   Aamot H.U., Hofgaard I.S., Lysoe E.;
RT   "Complete genome sequence of Luteibacter rhizovicinus strain LJ96T,
RT   isolated from the rhizosphere of barley (Hordeum vulgare L.) in Denmark.";
RL   Genom Data 11:104-105(2016).
RN   [3] {ECO:0000313|Proteomes:UP000182987}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LJ96T {ECO:0000313|Proteomes:UP000182987};
RA   Capua I., De Benedictis P., Joannis T., Lombin L.H., Cattoli G.;
RL   Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Membrane-anchoring subunit of succinate dehydrogenase (SDH).
CC       {ECO:0000256|ARBA:ARBA00004050}.
CC   -!- COFACTOR:
CC       Name=heme; Xref=ChEBI:CHEBI:30413;
CC         Evidence={ECO:0000256|PIRSR:PIRSR000178-1};
CC       Note=The heme is bound between the two transmembrane subunits.
CC       {ECO:0000256|PIRSR:PIRSR000178-1};
CC   -!- SUBUNIT: Part of an enzyme complex containing four subunits: a
CC       flavoprotein, an iron-sulfur protein, plus two membrane-anchoring
CC       proteins, SdhC and SdhD. The complex can form homotrimers.
CC       {ECO:0000256|ARBA:ARBA00025912}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the cytochrome b560 family.
CC       {ECO:0000256|ARBA:ARBA00007244}.
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DR   EMBL; CP017480; APG05382.1; -; Genomic_DNA.
DR   EMBL; JPLB01000016; KLD68000.1; -; Genomic_DNA.
DR   RefSeq; WP_046966631.1; NZ_JPLB01000016.1.
DR   AlphaFoldDB; A0A0G9HE18; -.
DR   STRING; 1440763.BJI69_16710; -.
DR   KEGG; lrz:BJI69_16710; -.
DR   PATRIC; fig|1440763.5.peg.683; -.
DR   OrthoDB; 9799441at2; -.
DR   Proteomes; UP000035585; Unassembled WGS sequence.
DR   Proteomes; UP000182987; Chromosome.
DR   GO; GO:0045281; C:succinate dehydrogenase complex; IEA:InterPro.
DR   GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016627; F:oxidoreductase activity, acting on the CH-CH group of donors; IEA:InterPro.
DR   GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR   CDD; cd03499; SQR_TypeC_SdhC; 1.
DR   Gene3D; 1.20.1300.10; Fumarate reductase/succinate dehydrogenase, transmembrane subunit; 1.
DR   InterPro; IPR034804; SQR/QFR_C/D.
DR   InterPro; IPR018495; Succ_DH_cyt_bsu_CS.
DR   InterPro; IPR014314; Succ_DH_cytb556.
DR   InterPro; IPR000701; SuccDH_FuR_B_TM-su.
DR   NCBIfam; TIGR02970; succ_dehyd_cytB; 1.
DR   PANTHER; PTHR10978; SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT; 1.
DR   PANTHER; PTHR10978:SF5; SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL; 1.
DR   Pfam; PF01127; Sdh_cyt; 1.
DR   PIRSF; PIRSF000178; SDH_cyt_b560; 1.
DR   SUPFAM; SSF81343; Fumarate reductase respiratory complex transmembrane subunits; 1.
DR   PROSITE; PS01000; SDH_CYT_1; 1.
PE   3: Inferred from homology;
KW   Heme {ECO:0000256|ARBA:ARBA00022617, ECO:0000256|PIRSR:PIRSR000178-1};
KW   Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PIRSR:PIRSR000178-1};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|PIRSR:PIRSR000178-1};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        25..49
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        55..80
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        101..124
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   BINDING         81
FT                   /ligand="heme"
FT                   /ligand_id="ChEBI:CHEBI:30413"
FT                   /ligand_note="ligand shared with second transmembrane
FT                   subunit"
FT                   /ligand_part="Fe"
FT                   /ligand_part_id="ChEBI:CHEBI:18248"
FT                   /note="axial binding residue"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000178-1"
SQ   SEQUENCE   130 AA;  13962 MW;  C02BB8C27FA2338C CRC64;
     MAQTGRPLSP HLQVYKWQVQ MASSILHRAT GIILAVGSLL IVWGLAALAA GQDAFATFTA
     CATSLLGTIV MIGWTLAFFY HLCNGIRHLV QDTGKGYAIE SFVRSSWMAI IVSIVLTVAV
     WAYVLTGGHA
//
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