ID   A0A0H2M5Z4_VARPD        Unreviewed;       473 AA.
AC   A0A0H2M5Z4;
DT   16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT   16-SEP-2015, sequence version 1.
DT   27-MAR-2024, entry version 24.
DE   SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KLN57788.1};
GN   ORFNames=VPARA_07990 {ECO:0000313|EMBL:KLN57788.1};
OS   Variovorax paradoxus.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=34073 {ECO:0000313|EMBL:KLN57788.1, ECO:0000313|Proteomes:UP000035170};
RN   [1] {ECO:0000313|EMBL:KLN57788.1, ECO:0000313|Proteomes:UP000035170}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TBEA6 {ECO:0000313|EMBL:KLN57788.1,
RC   ECO:0000313|Proteomes:UP000035170};
RA   Poehlein A., Schuldes J., Wuebbeler J.H., Hiessl S., Steinbuechel A.,
RA   Daniel R.;
RT   "Genome sequence of Variovorax paradoxus TBEA6.";
RL   Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KLN57788.1}.
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DR   EMBL; JZWI01000005; KLN57788.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0H2M5Z4; -.
DR   PATRIC; fig|34073.19.peg.811; -.
DR   Proteomes; UP000035170; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR047797; ISNCY_transpos.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   NCBIfam; NF033594; transpos_ISNCY_2; 1.
DR   PANTHER; PTHR35004:SF7; INTEGRASE PROTEIN-RELATED; 1.
DR   PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR   Pfam; PF13551; HTH_29; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000035170}.
FT   DOMAIN          135..320
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          415..450
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        424..447
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   473 AA;  53805 MW;  6D0C9A2D15CE1DC0 CRC64;
     MAMATSAATI TMTMREADRL KTIQAVVDRM LRVGQAAQRL GMSRRQVERL VSRYLDDGPS
     GLVSRKRGRP SNNQLAPGIA ERAITLIRER YADFGPTLAT EKLQECHGIA LSKETVRALM
     VATGLWTPRR QRAPKIHQPR NRRSCRGELI QIDGSDHAWF EDRAPACTLL VFIDDATSQL
     MQLHFVPTES SFAYFEATRS YLEQHGKPVA FYSDKASIFR SVRDSTDFGR GTTQYGRVLF
     ELNIDIMCAN TSQAKGRVER ANLTLQDRLV KELRLRGINT REAANAFAPH FIIDFNARFA
     KPAKRDFDAH RPVRDDEDLE LLFTWRLQRK VSLSLTLQHD RVIYLLKDSP DNRQLIHRYI
     DVFEYPDGRI ELRADGVNLV YERYDRLPQV DTAAIVENKR LSQALQVALV IQAQRDDRRK
     SSTPSRTNQG QAPYSTKALP GTKRSRQFTS QDLDEAVRAV CRAPKKTTVL ACG
//