ID A0A0H2MHM7_VARPD Unreviewed; 218 AA.
AC A0A0H2MHM7;
DT 16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT 16-SEP-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=HTH-type transcriptional repressor NicS {ECO:0000313|EMBL:KLN56340.1};
GN Name=nicS3 {ECO:0000313|EMBL:KLN56340.1};
GN ORFNames=VPARA_26460 {ECO:0000313|EMBL:KLN56340.1};
OS Variovorax paradoxus.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=34073 {ECO:0000313|EMBL:KLN56340.1, ECO:0000313|Proteomes:UP000035170};
RN [1] {ECO:0000313|EMBL:KLN56340.1, ECO:0000313|Proteomes:UP000035170}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TBEA6 {ECO:0000313|EMBL:KLN56340.1,
RC ECO:0000313|Proteomes:UP000035170};
RA Poehlein A., Schuldes J., Wuebbeler J.H., Hiessl S., Steinbuechel A.,
RA Daniel R.;
RT "Genome sequence of Variovorax paradoxus TBEA6.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KLN56340.1}.
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DR EMBL; JZWI01000012; KLN56340.1; -; Genomic_DNA.
DR RefSeq; WP_021006580.1; NZ_JZWI01000012.1.
DR AlphaFoldDB; A0A0H2MHM7; -.
DR PATRIC; fig|34073.19.peg.2719; -.
DR Proteomes; UP000035170; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001647; HTH_TetR.
DR InterPro; IPR041474; NicS_C.
DR InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR PANTHER; PTHR30328:SF54; HTH-TYPE TRANSCRIPTIONAL REPRESSOR SCO4008; 1.
DR PANTHER; PTHR30328; TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF17938; TetR_C_29; 1.
DR Pfam; PF00440; TetR_N; 1.
DR PRINTS; PR00455; HTHTETR.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF48498; Tetracyclin repressor-like, C-terminal domain; 1.
DR PROSITE; PS50977; HTH_TETR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00335}; Reference proteome {ECO:0000313|Proteomes:UP000035170};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 20..80
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DNA_BIND 43..62
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 218 AA; 25114 MW; 68291D97ED82614C CRC64;
MKATKDSLPE TIEPRSRDAD RSQLAILASA RDEFAQRGLA GARMDSIAER AGLNKRLIYY
YFGSKDDLFL AVLERTYADI REAEQRLHLD EIDPVEAIRQ LVSFTWHYYL EHPEFITLLN
SENLHCAAHL KRSERIQEMN SPLVQMLDTV LERGRRDKLF RAGVDPVQLY ISIASLCYFY
LSNNHTLSAI FGRDLRAPKA MAQRLSHMTD LVLGYVLH
//
