ID A0A0H5C0I4_CYBJN Unreviewed; 246 AA.
AC A0A0H5C0I4; A0A1E4S6D4;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=EMG1, NEP1 Emg1p {ECO:0000313|EMBL:ODV75087.1};
DE SubName: Full=NEP1 protein {ECO:0000313|EMBL:CEP21275.1};
GN Name=NEP1 {ECO:0000313|EMBL:CEP21275.1};
GN ORFNames=BN1211_1326 {ECO:0000313|EMBL:CEP21275.1}, CYBJADRAFT_166841
GN {ECO:0000313|EMBL:ODV75087.1};
OS Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617
OS / NBRC 0987 / NRRL Y-1542) (Torula yeast) (Candida utilis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Phaffomycetaceae; Cyberlindnera.
OX NCBI_TaxID=983966 {ECO:0000313|EMBL:CEP21275.1, ECO:0000313|Proteomes:UP000038830};
RN [1] {ECO:0000313|EMBL:CEP21275.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS1600 {ECO:0000313|EMBL:CEP21275.1};
RA Jaenicke S.;
RL Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000038830}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 /
RC NRRL Y-1542 {ECO:0000313|Proteomes:UP000038830};
RX PubMed=26150016; DOI=10.1016/j.jbiotec.2015.06.423;
RA Rupp O., Brinkrolf K., Buerth C., Kunigo M., Schneider J., Jaenicke S.,
RA Goesmann A., Puehler A., Jaeger K.-E., Ernst J.F.;
RT "The structure of the Cyberlindnera jadinii genome and its relation to
RT Candida utilis analyzed by the occurrence of single nucleotide
RT polymorphisms.";
RL J. Biotechnol. 211:20-30(2015).
RN [3] {ECO:0000313|EMBL:ODV75087.1, ECO:0000313|Proteomes:UP000094389}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 /
RC NRRL Y-1542 {ECO:0000313|Proteomes:UP000094389}, and NRRL Y-1542
RC {ECO:0000313|EMBL:ODV75087.1};
RX PubMed=27535936; DOI=10.1073/pnas.1603941113;
RA Riley R., Haridas S., Wolfe K.H., Lopes M.R., Hittinger C.T., Goeker M.,
RA Salamov A.A., Wisecaver J.H., Long T.M., Calvey C.H., Aerts A.L.,
RA Barry K.W., Choi C., Clum A., Coughlan A.Y., Deshpande S., Douglass A.P.,
RA Hanson S.J., Klenk H.-P., LaButti K.M., Lapidus A., Lindquist E.A.,
RA Lipzen A.M., Meier-Kolthoff J.P., Ohm R.A., Otillar R.P., Pangilinan J.L.,
RA Peng Y., Rokas A., Rosa C.A., Scheuner C., Sibirny A.A., Slot J.C.,
RA Stielow J.B., Sun H., Kurtzman C.P., Blackwell M., Grigoriev I.V.,
RA Jeffries T.W.;
RT "Comparative genomics of biotechnologically important yeasts.";
RL Proc. Natl. Acad. Sci. U.S.A. 113:9882-9887(2016).
CC -!- SIMILARITY: Belongs to the class IV-like SAM-binding methyltransferase
CC superfamily. RNA methyltransferase NEP1 family.
CC {ECO:0000256|ARBA:ARBA00008115}.
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DR EMBL; CDQK01000002; CEP21275.1; -; Genomic_DNA.
DR EMBL; KV453927; ODV75087.1; -; Genomic_DNA.
DR RefSeq; XP_020072126.1; XM_020214651.1.
DR STRING; 983966.A0A0H5C0I4; -.
DR GeneID; 30989047; -.
DR OMA; VHNTFEL; -.
DR OrthoDB; 275493at2759; -.
DR Proteomes; UP000038830; Unassembled WGS sequence.
DR Proteomes; UP000094389; Unassembled WGS sequence.
DR GO; GO:0070037; F:rRNA (pseudouridine) methyltransferase activity; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0070475; P:rRNA base methylation; IEA:InterPro.
DR CDD; cd18088; Nep1-like; 1.
DR Gene3D; 3.40.1280.10; -; 1.
DR InterPro; IPR029028; Alpha/beta_knot_MTases.
DR InterPro; IPR005304; Rbsml_bgen_MeTrfase_EMG1/NEP1.
DR InterPro; IPR029026; tRNA_m1G_MTases_N.
DR PANTHER; PTHR12636; NEP1/MRA1; 1.
DR PANTHER; PTHR12636:SF5; RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE NEP1; 1.
DR Pfam; PF03587; EMG1; 1.
DR SUPFAM; SSF75217; alpha/beta knot; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000094389};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
SQ SEQUENCE 246 AA; 27167 MW; 31459D50458CFD9D CRC64;
MAKGEKSTKE VLPASLVPEQ PQALSSKDKN TQRLIVVLSA ACLETHKISS GHGSGHDKYA
LLNCDDHQSL LQKMGRDISE ARPDITHQCL LSLLDSPINK AGRLQVYIHT ARGVLIEVNP
SVRIPRTFKR FSGLMVQLLH KLSIKSVNSE EKLLKVIKNP ITDHLPTKCK KVTLSFDAPL
IRVQDYVAKL DEDESICVFV GAMARGKDSF ADEFIDEKVG LSDYPLSASV ACSKFCFGCE
DAWGIY
//
