ID A0A0H5CNN8_9PSEU Unreviewed; 429 AA.
AC A0A0H5CNN8;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=RNA polymerase sigma-54 factor RpoN {ECO:0000313|EMBL:CRK59238.1};
OS Alloactinosynnema sp. L-07.
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae.
OX NCBI_TaxID=1653480 {ECO:0000313|EMBL:CRK59238.1, ECO:0000313|Proteomes:UP000076116};
RN [1] {ECO:0000313|Proteomes:UP000076116}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=L-07 {ECO:0000313|Proteomes:UP000076116};
RA Ramaraj T.;
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; LN850107; CRK59238.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0H5CNN8; -.
DR STRING; 1653480.gene:80948115; -.
DR KEGG; alo:CRK59238; -.
DR OrthoDB; 9814402at2; -.
DR Proteomes; UP000076116; Chromosome i.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 2.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000076116};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 316..365
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 429 AA; 46683 MW; 9A3872A4E30B76E4 CRC64;
MDVFTARQPA LRMDLRARME FRVGPAQLLL SELLPLPVCD LQVRLDAEVA ANPALEIGDP
DTCPGCGHPI WRRHCLRCVD PAHPAPLDTV GTCTTPRDQM LRDCAAALPA AGRRIAAYLV
ADVDDYGVLD ESPQAIAHRL GVSAEDVLAA IGTLRRAGFA GMCARDLVES IQLQAVATGE
ELGMPQMLHE LLARGLAELA EGRQTPIRFR PALAWLRVNM VPAVFEQAEV APVDPVDIVV
HRNHGQLHTT VIPGPWSAAR VADSYRAVGD HPAVRGELIR ASRFIEALDK REHSLLMVSQ
AVVTHQSARV IHGPAEHRKL TRRQIAAEVG LHESTVSRVV AGKRVSIPSG ETVALASLFG
APSDLHDCIR EVIDHEAAPL SDADVAIALA QRGHRAARRT VAKYRAELGI PDQYHRRHDA
HPVREHVLS
//
