UniProt: A0A0J6VDK8

Database: UniProt
Entry: A0A0J6VDK8_9MYCO

LinkDB:  A0A0J6VDK8_9MYCO 
Original site:  A0A0J6VDK8_9MYCO

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Ontology (5)   
   GO (5)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   EMBL (3)   
Protein domain (6)   
   InterPro (4)   
   Pfam (1)   
   PROSITE (1)   
Literature (1)   
   PubMed (1)   
All databases (16)   

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ID   A0A0J6VDK8_9MYCO        Unreviewed;       218 AA.
AC   A0A0J6VDK8;
DT   14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT   14-OCT-2015, sequence version 1.
DT   27-MAR-2024, entry version 38.
DE   RecName: Full=Large ribosomal subunit protein uL3 {ECO:0000256|HAMAP-Rule:MF_01325};
GN   Name=rplC {ECO:0000256|HAMAP-Rule:MF_01325,
GN   ECO:0000313|EMBL:KMO69075.1};
GN   ORFNames=EUA04_10645 {ECO:0000313|EMBL:TDL10352.1}, MOBUDSM44075_04496
GN   {ECO:0000313|EMBL:KMO69075.1}, WN67_08955
GN   {ECO:0000313|EMBL:KKF02274.1};
OS   Mycolicibacterium obuense.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC   Mycolicibacterium.
OX   NCBI_TaxID=1807 {ECO:0000313|EMBL:KMO69075.1, ECO:0000313|Proteomes:UP000036313};
RN   [1] {ECO:0000313|EMBL:KMO69075.1, ECO:0000313|Proteomes:UP000036313}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 44075 {ECO:0000313|EMBL:KMO69075.1,
RC   ECO:0000313|Proteomes:UP000036313};
RX   PubMed=26079817; DOI=10.1093/gbe/evv111;
RA   Das S., Pettersson B.M., Behra P.R., Ramesh M., Dasgupta S.,
RA   Bhattacharya A., Kirsebom L.A.;
RT   "Characterization of Three Mycobacterium spp. with Potential Use in
RT   Bioremediation by Genome Sequencing and Comparative Genomics.";
RL   Genome Biol. Evol. 7:1871-1886(2015).
RN   [2] {ECO:0000313|EMBL:KKF02274.1, ECO:0000313|Proteomes:UP000034150}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=UC1 {ECO:0000313|EMBL:KKF02274.1,
RC   ECO:0000313|Proteomes:UP000034150};
RA   Greninger A.L., Cunningham G., Chiu C.Y., Miller S.;
RT   "Genome sequence of Mycobacterium obuense UC1.";
RL   Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:TDL10352.1, ECO:0000313|Proteomes:UP000294952}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=22DIII {ECO:0000313|EMBL:TDL10352.1,
RC   ECO:0000313|Proteomes:UP000294952};
RA   Tiago I., Alarico S., Pereira S.G., Coelho C., Maranha A., Empadinhas N.;
RT   "High-quality-draft genome sequences of five non-tuberculosis
RT   mycobacteriaceae isolated from a nosocomial environment.";
RL   Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC       near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S
CC       subunit. {ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003906}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a cluster with
CC       proteins L14 and L19. {ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003906}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC       {ECO:0000256|ARBA:ARBA00006540, ECO:0000256|HAMAP-Rule:MF_01325,
CC       ECO:0000256|RuleBase:RU003905}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KMO69075.1}.
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DR   EMBL; LAUZ02000001; KKF02274.1; -; Genomic_DNA.
DR   EMBL; JYNU01000057; KMO69075.1; -; Genomic_DNA.
DR   EMBL; SDLP01000002; TDL10352.1; -; Genomic_DNA.
DR   RefSeq; WP_043405756.1; NZ_SDLP01000002.1.
DR   STRING; 1807.MOBUDSM44075_04496; -.
DR   PATRIC; fig|1807.13.peg.222; -.
DR   OrthoDB; 9806135at2; -.
DR   Proteomes; UP000034150; Unassembled WGS sequence.
DR   Proteomes; UP000036313; Unassembled WGS sequence.
DR   Proteomes; UP000294952; Unassembled WGS sequence.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.160.810; -; 1.
DR   Gene3D; 2.40.30.10; Translation factors; 1.
DR   HAMAP; MF_01325_B; Ribosomal_L3_B; 1.
DR   InterPro; IPR000597; Ribosomal_uL3.
DR   InterPro; IPR019927; Ribosomal_uL3_bac/org-type.
DR   InterPro; IPR019926; Ribosomal_uL3_CS.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   NCBIfam; TIGR03625; L3_bact; 1.
DR   PANTHER; PTHR11229:SF8; 39S RIBOSOMAL PROTEIN L3, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR11229; 50S RIBOSOMAL PROTEIN L3; 1.
DR   Pfam; PF00297; Ribosomal_L3; 1.
DR   SUPFAM; SSF50447; Translation proteins; 1.
DR   PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE   3: Inferred from homology;
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_01325};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_01325};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003906};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01325,
KW   ECO:0000256|RuleBase:RU003906}.
SQ   SEQUENCE   218 AA;  23001 MW;  0D17958774F7C44A CRC64;
     MARQGILGTK LGMTQVFDEN NKVVPVTVVK AGPNVVTRIR TPERDGYSAV QLAYGEISPR
     KVTKPVTGQF AAAGINPRRH LAELRLENEA AAAEYEVGQE LTAEIFADGA YVDVTGTSKG
     KGFAGTMKRH GFKGQGASHG AQAVHRRPGS IGGCATPGRV FKGTRMSGRM GSDRVTTQNL
     KVHKVDAENG VLLIKGAVPG RNGGLVVVRS AIKRGEKA
//

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