ID A0A0J7K4D4_LASNI Unreviewed; 478 AA.
AC A0A0J7K4D4;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=Retrovirus-related pol polyprotein from transposon tnt 1-94 {ECO:0000313|EMBL:KMQ85187.1};
DE Flags: Fragment;
GN ORFNames=RF55_16402 {ECO:0000313|EMBL:KMQ85187.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ85187.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ85187.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ85187.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ85187.1}.
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DR EMBL; LBMM01014410; KMQ85187.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0J7K4D4; -.
DR STRING; 67767.A0A0J7K4D4; -.
DR PaxDb; 67767-A0A0J7K4D4; -.
DR OrthoDB; 3354256at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR42648:SF11; TRANSPOSON TY4-P GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 89..103
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 254..426
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 63..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 478
FT /evidence="ECO:0000313|EMBL:KMQ85187.1"
SQ SEQUENCE 478 AA; 53747 MW; 1BF05DABEDDFE554 CRC64;
MKLKNSDNWG IWKFQRRVLL NLHGALKVAL GTNAKPAALA EGANKATRTA YVKSLAAWEK
ADAMAQKRGK SKRGRGRGGA SRVSTKPGKC YVCREAGHWA RECLQRKGDD DREGSKGGNS
ASVKKLHGEG LVSEALTSKS SQQTGTYEAF DTPTPVRIGD GGCIEACGKG SINVNMFDEK
NWNENHLIDV LHVSKLKYNL FSVGAALDKG LEMQSTNITC ELVKDGRIVA IGVRRGKMYV
MQFKVVEPKM SRWRQDPPEA LITSTSTLKD WHEKLAHQNF RHVKQILDRF QIPDDYSHYR
ATYFIESKAE TTDCVENFLK KAEKQCPGGV RVLRTDNGLE FVNNEMKQLT NRLGIRHQRT
VTYTPEQNGS AERNNRTLKE AGLMLGGGFR AEFWAEAVNT AVNTLNRTGM SSVKGVTPLE
LWFQRKPDIK DLHIFGEEVF VRVAFNWTRY NWTRCKWTRN FAHGSIGHVS IGHRSFGH
//
