ID A0A0J7KFH2_LASNI Unreviewed; 2152 AA.
AC A0A0J7KFH2;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Reverse transcriptase {ECO:0000313|EMBL:KMQ89009.1};
DE Flags: Fragment;
GN ORFNames=RF55_11402 {ECO:0000313|EMBL:KMQ89009.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ89009.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ89009.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ89009.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ89009.1}.
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DR EMBL; LBMM01008278; KMQ89009.1; -; Genomic_DNA.
DR STRING; 67767.A0A0J7KFH2; -.
DR PaxDb; 67767-A0A0J7KFH2; -.
DR OrthoDB; 3391474at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd09077; R1-I-EN; 1.
DR CDD; cd01650; RT_nLTR_like; 1.
DR Gene3D; 3.60.10.10; Endonuclease/exonuclease/phosphatase; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR InterPro; IPR005135; Endo/exonuclease/phosphatase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR19446:SF415; REVERSE TRANSCRIPTASE-RELATED PROTEIN; 1.
DR PANTHER; PTHR19446; REVERSE TRANSCRIPTASES; 1.
DR Pfam; PF14529; Exo_endo_phos_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF56219; DNase I-like; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50878; RT_POL; 1.
DR PROSITE; PS50158; ZF_CCHC; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Nucleotidyltransferase {ECO:0000313|EMBL:KMQ89009.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:KMQ89009.1};
KW Transferase {ECO:0000313|EMBL:KMQ89009.1};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 1070..1085
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 1093..1106
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 1594..1874
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT REGION 280..362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 387..579
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 787..806
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 830..906
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1148..1171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 654..709
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 280..316
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 340..354
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 390..417
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 476..492
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 493..511
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 868..894
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KMQ89009.1"
FT NON_TER 2152
FT /evidence="ECO:0000313|EMBL:KMQ89009.1"
SQ SEQUENCE 2152 AA; 241037 MW; 7459870A3B60A6C6 CRC64;
GNSEVPGFGA RGVMVPDPLA SSSSVGLCFG SINRPPLGLH TEAGSDIALW SSTSPPRTIA
TREDGYHKEL QENSHLADRE TALDILASMG NDRRIAYDRD AFMAILKVMD YVDRLYEYGD
KMKNGRNYLL SKLRTQETQE VRMYSLDSSG LVLGQNLLNS GEMLSSPIVR PYGGDLLTLS
PLSRPSPARF SYSVLRCDEL EQTRINLSRI DTTVGPPSIR REINSTEDQD LVNRIEQVQE
RIDHINCEIA TKNASLRLMD AVAGSVLEDL ASNVSLEADQ RVGRARRRGE AGRPRGGPPR
TRSPNKHDKT AMDKDNKMEI TLPPQGIRTP SGRRESPTVP GALPSSSDAG PTLSSPTGGG
LKVATVEDEL DPRDPLDLTF VDCSSVLEDE SRVPPQTTSL PGVNEDLALT STPSKNTRSS
KRKAKKVSPD AITPSSEEIA MATNRIPKIV LRKMKDRSKK RMKSRTAESE EDTATTPEDT
SSVRMSADSD ISEPTTRSKK KIAKVSEEES DVEYTGTDYL DPEYSSKLRS GSNRVRRESL
ENTAEPPSQD TSRRVHNRRK KKDSFRVWSA AEDGEDDDTE FCPEDLKIMG ATAIGAIGID
CLKTTEFERK NSPNINGAIS GVMKRKIRRA ADVINTLVYK AETKGDPGFL RIRNRELEAE
VEKLRLEEVF KKREMDDMRA IVADLKREVY ELRGRLDDAE EDARKARESY RINRRVLLKE
NRDNLAAALP PLPTDSALSV KSADTQFDWD MLKESDCGTQ QTEKPPQESM DVDVDVVKPP
TAPAAVVISG AKPGTGTEKQ SNKFQEDQIG EINLQIKDLV RKKRELRREV ELGNGEKGSA
GPSSGSLERP LPQRVPKPKP RIVSNVQVVP PKATTKRSQR GATTGPSGDI QSGKSKVSIR
RPPRSSAVMI TGNREDFSYA DALRKARGSI SLGELEINKT KVRKAANGSL LIEVMGPGGA
EKASKLKDKL IEVLKDDARV TRPVTKGEVR LIGLHDATST EEIIKAVSGY GNCFTEDIKL
GPIHPMRNGL YTVWVQCPLG AAVKIANYGK IGVGWTQVRV DLLNNRPVQC FKCWRFGHLK
HSCPSRDDFG GSCFRCGDEG YIARNCGAPP ACKICKSDGR TYNHRLGSNL CPAVNISARI
KPTPNLINAP GSSKEGAAEN NHEDKGPAEP CSITPSDKWF ISLDGSSAIY FDPNLTNLRY
RLARRGDKYV AAICGPYLFV SVYISPNLHL REYDAFLNDL SALLSSRTDN VIVAGDFNAK
ADLWGSNFTN QRGLQVVRWA AERDLRIVNV GDTPTCVRPQ GSSIVDLTWS SPDLLPLIDS
WEVKEDMEWL SDHVCISFNI CTGRPSLPPT RGLNRRWNLR KFDRDFFEAA LVWGSRNPDA
GDVLDLNQSI RDLDKLMEVA CDAAAPRIGP RKPRRSAYWW SESVAVLRTA CLHARRAWQR
AKRRRRPPET TNRLGVTYKT ARKDLRLEIN RLKARAWQEL IESIDKDPWG LPYRLVLGKL
RPTAPGLSEL LERDVLSNLL DSLFPRNDLP DPLGDWSDFV WSNDWEISLE EVRKALRKGS
SSLSKAPGPD GFRLILWKRA PKEILGWVTN IYNICLKTGE FPVAWKRANL VLIPKAGNKN
AGLQASDAPK ARPICLLDEI GKTFERVMAE RIHFWQTTNQ ESNLSKSQYG FRKNRSTCDA
LSLFRKITSS AVKNGGFAFA VSLDISNAFN SIPWRKIRRA LRDRGYPTYI RRILDSYFSD
RNIRYLNKDG RWDTKSMEAG VPQGSVLGPV LWNIAFDEVL DLAEEDEQSH VICYADDTLI
IVTGKDLRLT QLRASILVSR AIIVIKRLGL KVAKEKTEAI LFHGRGAIGL PTEILVEDTP
IKFSSSIKYL GIIVDVNWLF SEHFRYIEEK AGRVVRALNR LMPNLRGPDE RRRRLFANVV
HSVILYGAPI WADVFVRKSC AQPGLYRLQR TIAQRVISAY RTVSSNAALL LARLPPLKLL
ATARKRTFER IKEIKDRDCN EVINKKEIRD SEFTILCNSW RNILEKPNTP GEFTKIFIVP
RLEEWLTRDT VNSLSFHLTQ ILTDHGCFGK YLHRIRKRPD TNCFMCGMDE EDDAHHTLMH
CPTWDTRRLE LREKLGMPVG FSMDDVIECI MSSRESWIAF SSFVEGVMRE KE
//
