ID A0A0J7KGV7_LASNI Unreviewed; 1390 AA.
AC A0A0J7KGV7;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Protein rrp5-like protein {ECO:0000313|EMBL:KMQ89446.1};
GN ORFNames=RF55_10927 {ECO:0000313|EMBL:KMQ89446.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ89446.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ89446.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ89446.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ89446.1}.
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DR EMBL; LBMM01007760; KMQ89446.1; -; Genomic_DNA.
DR STRING; 67767.A0A0J7KGV7; -.
DR PaxDb; 67767-A0A0J7KGV7; -.
DR OrthoDB; 167902at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR CDD; cd05693; S1_Rrp5_repeat_hs1_sc1; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 4.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR045209; Rrp5.
DR InterPro; IPR048059; Rrp5_S1_rpt_hs1_sc1.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 5.
DR SMART; SM00316; S1; 8.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50126; S1; 5.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 78..165
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 431..500
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 520..588
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 692..758
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 807..868
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 15..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 974..1048
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1063..1123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..43
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1001..1048
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1083..1116
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1390 AA; 156829 MW; BB3BEA66CFABEC0A CRC64;
MFQETLKHCA KKRGLHMESF PRGGKKPEIK RSSNVFDESR SNKKHKTRIK KRDNNVNVKE
INLIATAERL SNATLREGMT ILGRISRVSE YELIVSIPGG ILGRVEVTNL SESYTNLLQN
IISTKAIQSN EFKPLPDLYN PGDYVVCYVK SINLQGKWLY NLSLEPQLIN QNVHSSYLVQ
NAMIVCTIKS IEDHGYVVDT GISNIRAFLA TENVDKGKQY FPGNQLLCII KEIETAEYSS
VIKLSAKKKK INNASIHDIV SLDALTPGTK LSLCVTKVLS NGLQVTFGKD NIGYINQIYL
DNPLAAYIEN MEVTGTLLYV LPTVKLAYFS LLTDVPEKER LSKGDIIRKA KVSYRESNGI
ILKISKSGLR GFVSFVKTNV PFAKISTEFK QGSAHKCRIL AYNWMEHLYV CTMEDEVLKQ
KYFSASDLNC GDIITVNVTD IDTNNGYIHV QAGNISGFVP PIHVSDSGLS ALNKLKIGDN
IEARVLQPKI SNMNVMFTLK QSLLKSKLPV LHDIHDAQCG SKYHGTITKI DKNGLLVRFY
GALKGWVPRT ALNSDTCNMN WNYSMGQTVT VCVESIEKNE SKMKLQIVTE KRKQQTVSFS
IGEMIEGTVT ESSVKGVYLR IHKKEDDENV TTGFLPAGHM APCIEIGGLM ASRCTPGDVI
SALVFATKPG VILSRTFVTQ EQYRSFDSLK VGDCIPCTIR DISQDGVRVI LPIENYSKLG
FVSYKNVSNF ELLYVNQMLF VKITTINKRE KHLTLTMTLK DVWDSPLENE VKMMTAVDIL
SLYLNRLAEL AKNTFYENKP ISSAILGQKV TGIVEKITEH GLVLRLDNHL TGTVRRDHYS
GDVQVGDKVF GTILWKNYVH ELVDVSLLPR ITNGVSSKQR TLPELPTGVV LRAEILMITK
WLILVLIKRN GAGYLAALPV RRHLNDVSPD LKPYTIHARI RLYVVMTGNE SDIIPVCLLK
SAFETKIPKD VTATTKKKLK RKKVSEQHDV TLTNPPEQPE QVPEKRSKKE HEAEIEEEEE
GRVKDIDEHS ESNKDSSDES EKGEDEPVAD KLHIQECGFS WDEKASAAAA APAETSSDDE
EEPEEEPKRK KKKLSAAERR EQEREEERKI RQREEALASD QVPNSTDQFD KLVLSSPDSS
LIWLQYMAYH LQATEIDKAR SVAKRAIKTI NFREENERLN VWNAWLNLES RFGTPESLND
VFQEAVRTND AFRIYTHMLT VHADAGRKAE LEKLIDTMIG KFKQDPGTWT NCGAALLKIG
LKEKSRHIMQ RAIQSLPASQ HVNLLVRFAN LENKLGEKER AQTLFENILS SYPKRVDVWS
CYVDCLIKSE DIDIARRVLE RACVQTLPAR KMKTLFAKFI SFEEKYGTPE AVARIVQMAA
DYVEKQCNRE
//
