ID A0A0J7KP02_LASNI Unreviewed; 2507 AA.
AC A0A0J7KP02;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 08-NOV-2023, entry version 22.
DE SubName: Full=Reverse transcriptase {ECO:0000313|EMBL:KMQ92001.1};
GN ORFNames=RF55_8070 {ECO:0000313|EMBL:KMQ92001.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ92001.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ92001.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ92001.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ92001.1}.
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DR EMBL; LBMM01004906; KMQ92001.1; -; Genomic_DNA.
DR PaxDb; 67767-A0A0J7KP02; -.
DR OrthoDB; 3310009at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd09077; R1-I-EN; 1.
DR CDD; cd01650; RT_nLTR_like; 1.
DR Gene3D; 3.60.10.10; Endonuclease/exonuclease/phosphatase; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR InterPro; IPR005135; Endo/exonuclease/phosphatase.
DR InterPro; IPR044822; Myb_DNA-bind_4.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR19446:SF415; REVERSE TRANSCRIPTASE-RELATED PROTEIN; 1.
DR PANTHER; PTHR19446; REVERSE TRANSCRIPTASES; 1.
DR Pfam; PF14529; Exo_endo_phos_2; 1.
DR Pfam; PF13837; Myb_DNA-bind_4; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00343; ZnF_C2HC; 3.
DR SUPFAM; SSF56219; DNase I-like; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotidyltransferase {ECO:0000313|EMBL:KMQ92001.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:KMQ92001.1};
KW Transferase {ECO:0000313|EMBL:KMQ92001.1};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 1748..2066
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 99..169
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 295..339
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 444..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1155..1251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1794..1814
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2432..2452
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 990..1017
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 99..113
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 121..138
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 139..165
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 316..331
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1177..1204
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1230..1246
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2432..2451
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2507 AA; 279910 MW; 57CB71B23B98484B CRC64;
MKMDQDIIVK NLPSQEERTS RDRRGGDIVP VPAVSSSYDG PAVGFEKSLA VEMDIASTGG
TEESVGTQRR DAAVLPDKTW NPELRLVRVD EIVTFRSPLR RPPKDRDRKA GAIRRQLGSP
PDTERAQSSA IKISDEEVSS EASSVKESDK DRIAKGDRRK RGRPPTGEWV GITKAKADYC
AIKARELQLD EIEKILDPRA PPKWTKSKQN LPKVEDLSRE VEELSHTEIE KKALHELRIA
IRRLDASILE LSDRVPRRIK AQTQLGKARD DYLRRKVERL KGELGIARLE IASLRASSSP
AGHSPPHKKA RGSNETTTRE TGTQMEASEV SSPDPTVVPL PASSSVRKVM VDIGSSPVRC
VASLMVPSAP VKVVNGTRDE VSLANSRNLT ALEQSLLDQI EALVTQKGSL LDDIGRIRGD
LDYPRKESFL PASDGKHLLN IPVSNSVKTK KKRKKKRKGK IKVDTDSART YVPQNAVKSQ
VKGMNSLFSV VTDDLWSRVI GRKTKRLAHR ESLLASGVTR GGNMKVNHQS TDRLPEQADS
FIKGAVNERR RGSGPGPRPP TTAAVSVSIK PGVGLSYRDV MAEARSKINL EKLGIMNSRI
RQTITGGILI QIPGKDRSKK ADELVSRMNA VLKSKGVTIG RPSKCSELIM RGLDITVRPE
DICAQIAKVG GCESEEIRIG QIRETSSGLG SVWVRCPALA ARRLTDVGGF RVGWGRAIVE
PLQPRPIEKL GAPAAGVEGT TVPGAPTSLS YDGLTAVSAA GTAVEMATAD GVSDPAEAVG
DLFIGRPSWL DEIDPELENE EMEAQEEATS KKRKADVSPV ISISSGEDVV APYSLRGSRK
CRIVDSPEED KIDLTRLSET PVRSDDASVA DRGAGAAGLS DAKRKEVSAG YKTKKRGFTQ
TTPPTPRIDL KPGLDDISYD ELIDMGVTDA GTVGLECTGV MDAVRVKSKR LQGPLNGALK
NKIRKVNDVI RVLIEKGEAS GDPVLWETKA NKLAEELAVA RKDLDNCKKE NVALKKKKED
LWNEITKLRI EVKKIDDLKS DNDSLWKAIN EMRTDMRKLS RERSPGGLTG GGSYLRTKLT
FCDDALPVAG PSGIGSVSGT PSAVTPFLES KEEVKLHMSN MVKQLRNVRK KKRRQDWNEE
GFDMDWEQVE KVENPLPQRQ PMSSKPRIIT NVQLVPPREE VEEEENSTGK RKNTHEENWT
KVANKRGKSN RKGRRAGLSG EQDPIEPVSS PVPRDDRKKE TQRRAAAKLA RMPSKTAIVS
ITGRSSDFSY RDALTAAREK ISLSELKIEK TRLRRAANGG YLIEIMDSGC YEKARALQDK
LRAVLPEKMA NVTRPMKNGE LRFIGLDVTA TSEEVADFMI ENGKCEEDDV KVGDIQAMRN
GLYTVWARCP LAVAAYIAKK RKVRIGWTYA RVEMLEARPT QCFRCWGFGH VRSFCSSSTD
RSRAYFNCGA DGHSFRACTQ PPHCVICETE GRKSDHRLGS VLCKVDKNPK KLGSTAVTPA
QDLLEQHMMD LQSGLCVVSE PVRIPNTAHW FGSMDERAAV CWKPEIFRDI CTLVRRGQHW
LAIKCRGIFV LACYISPNVP LAEFSNFLDE LSEVLDGLVG SKVIICGDFN SKSILWGSPY
TNTRGNYVEQ WAATHDLRLA NVGNTPTCVR TQGSSIVDLT WASPGIIGLV NEWLVREDME
TLSDHAYITF CVGGSFLPYK SGKVQRRWNW SKMDKTAFEL SLVWACHREP GSEGPQQQLS
AADSSLWIDR VMEEAADAST PRSGRRRPRK TTYWWSDTIA ELRSESIRVR RLWQRGRKRR
RPHSGSENLE EDYRLKKKPY PERQVHAAAL GPDGFTAKLW KKVTGGMNDR DIPARDLSEN
QFGFRKKRST CDALLRVKAI TTEAVNEGGV AIAIGLDIEN VFNSLPWRTI RKVLIDKGFP
VYLRRIVDSY LSDRHIQYRT MEGKTATRRM EAGVPQGSVL GPLLWNIAFD SVLTTPKEIG
CHVICYADDT LVIATADCVQ TAVVRAGIQV SIIMREIQRL GLRVAEAKTE TVVFHGKVRP
DPLPRVSVGR SKIDLGKSMK YLGIIIDSRW SFRDHFSYVE EKAFKVTRAL GRLMPNLRGP
DENKRQLYAN VVQSRQWKIH LSNPSLYGKH TLEVINPNFE EWIARGHGRL GYHLTQFLTG
HGSFGSFLHK IGKRGDPSCF HCDAEVDTVD HTLRECPAWS EDRVQLKIKF GMADDEPVTL
EKVVRKILES QDYWSFFVRS FALAKIMEEL TLIDAENNKE YKITVSKEDA ARAKKDHIFA
YSLLQQAKKY AAEEIKDIID LETDDATDCS TASNLDTSGT SDTKDQHIWT RAETLLLITL
YKEYEEMFNN PKMSAKQCWN NISKKMKDAG YHISGIKCTT KFQCLKRTFK SVTDHNKKSG
NNRRKWEYYE VMHEIFGRKP WVEPIATAGS SVNTSANTNN DTTNNTENND AIKSVPKKRK
IQDVVEDYLE KSLEMKTEKE INAKKRHEEK MTRLTSIENL ITEILKK
//
