ID A0A0J7P4Y3_LASNI Unreviewed; 1002 AA.
AC A0A0J7P4Y3;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Rna polymerase-associated protein ctr9-like protein {ECO:0000313|EMBL:KMR04974.1};
GN ORFNames=RF55_315 {ECO:0000313|EMBL:KMR04974.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMR04974.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMR04974.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMR04974.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMR04974.1}.
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DR EMBL; LBMM01000098; KMR04974.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0J7P4Y3; -.
DR STRING; 67767.A0A0J7P4Y3; -.
DR PaxDb; 67767-A0A0J7P4Y3; -.
DR OrthoDB; 3573659at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR031101; Ctr9.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR14027; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9; 1.
DR PANTHER; PTHR14027:SF2; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG; 1.
DR Pfam; PF13374; TPR_10; 1.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF14559; TPR_19; 2.
DR Pfam; PF13181; TPR_8; 3.
DR SMART; SM00028; TPR; 12.
DR SUPFAM; SSF81901; HCP-like; 2.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 197..230
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 305..338
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 340..373
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 450..483
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 716..749
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 837..1002
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 837..880
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 893..954
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 964..987
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 988..1002
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1002 AA; 115460 MW; 62E968638441E1C8 CRC64;
MAGSIEIPLR DTDEVIELYL DQLPDGDEVL GILRQEHAQL NIWVNLALEY YKQQKIEDFI
KILESSRIDA NIDYRDYEKD QMRALDMLAA YYVQEANKEK NKDKKRDLFT KATLLYTTAD
KIIMYDQNHL LGRAYFCLLE GDKMEQADAQ FNFVLNQSPN NIPSLLGKAC IAFNKKDYRG
ALAFYKKALR TNPHCPAAVR LGMGHCFMKL NNQEKARLAF DRALQLDGQC VGALVGLSVL
KLNQQQPESI RSGVQMLSKA YTIDSTNPMV LNHLANHFFF KKDYNKVQHL ALHAFHNTEN
EAMRAESCYQ LARAFHVQGD YDQAFQYYYQ ATQFAPPVFV LPHFGLGQMY VYRGDAENAA
QCFEKVLKAQ PGNYETMKIL GSLYANSSSQ SKRDIAKNHL RKVTEQFPDD VEAWIELAQI
LEQSDLNAAL NAYGTATRIL KEKVQADIPP EILNNVGALH YRLGNLEEAR KNLEESLARS
KADALHDSVY YNSIAVTTTY NLARLNEALC IFDRAEKLYK DILKEHPNYV DCYLRLGCMA
RDKGQIYEAS DWFKDALRIN NEHPDAWSLL GNLHLAKMEW GPGQKKFERI LKNPTTSTDA
YSLIALGNIW LQTLHQSGKD KEREKRHQDR ALAMYKQVLR NDPKNIWAAN GIGAVLAHKG
CVNEARDIFA QVREATAEFC DVWLNIAHIY VEQKQFVSAI QMYENCLRKF YRYHHVEVLQ
YLGRAYFKAG KLKEAKLTLL KARRVAPQDT VLLYNIALVL QRLATQILKD EKSTLTTVLQ
AVHELGLSHK YFQYLSTHGD RMEQLAEGEA RRCQDLLSQA QYHVARARRL DEEEKMLRRK
QEEERQAFKM RQTEEQRKME EMRRQKEEEM LQKRQEYVEK TKNALVFGEM PSEKPGRKGK
RVRTDQYVSD SGGSDRDEGR EEVPKERRRK RKPSSEMKER KSRGSESDQP KRKRGKRNAG
TRKEKSTRRG AVETFKGKIK SKETISTSES DSDTGGLKIA SG
//
