GenomeNet

Database: UniProt
Entry: A0A0J9EXP3_9CYAN
LinkDB: A0A0J9EXP3_9CYAN
Original site: A0A0J9EXP3_9CYAN 
ID   A0A0J9EXP3_9CYAN        Unreviewed;       406 AA.
AC   A0A0J9EXP3;
DT   14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT   14-OCT-2015, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=Transposase {ECO:0000313|EMBL:KMW70752.1};
GN   ORFNames=WN50_32850 {ECO:0000313|EMBL:KMW70752.1};
OS   Limnoraphis robusta CS-951.
OC   Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC   Oscillatoriales; Sirenicapillariaceae; Limnoraphis.
OX   NCBI_TaxID=1637645 {ECO:0000313|EMBL:KMW70752.1, ECO:0000313|Proteomes:UP000033607};
RN   [1] {ECO:0000313|EMBL:KMW70752.1, ECO:0000313|Proteomes:UP000033607}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CS-951 {ECO:0000313|EMBL:KMW70752.1,
RC   ECO:0000313|Proteomes:UP000033607};
RA   Willis A., Parks M., Burford M.A.;
RT   "Draft genome assembly of filamentous brackish cyanobacterium Limnoraphis
RT   robusta strain CS-951.";
RL   Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC       family. {ECO:0000256|ARBA:ARBA00008761}.
CC   -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC       family. {ECO:0000256|ARBA:ARBA00011044}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KMW70752.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LATL02000063; KMW70752.1; -; Genomic_DNA.
DR   RefSeq; WP_049558262.1; NZ_LATL02000063.1.
DR   AlphaFoldDB; A0A0J9EXP3; -.
DR   PATRIC; fig|1637645.4.peg.1181; -.
DR   OrthoDB; 442016at2; -.
DR   Proteomes; UP000033607; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR   InterPro; IPR010095; Cas12f1-like_TNB.
DR   InterPro; IPR001959; Transposase.
DR   NCBIfam; NF040570; guided_TnpB; 1.
DR   NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR   PANTHER; PTHR36172; -; 1.
DR   PANTHER; PTHR36172:SF1; RESOLVASE/INVERTASE-TYPE RECOMBINASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF01385; OrfB_IS605; 1.
DR   Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE   3: Inferred from homology;
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000033607};
KW   Transposition {ECO:0000256|ARBA:ARBA00022578};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          170..284
FT                   /note="Probable transposase IS891/IS1136/IS1341"
FT                   /evidence="ECO:0000259|Pfam:PF01385"
FT   DOMAIN          296..363
FT                   /note="Cas12f1-like TNB"
FT                   /evidence="ECO:0000259|Pfam:PF07282"
SQ   SEQUENCE   406 AA;  47683 MW;  412DF252B4EF83F7 CRC64;
     MIVYEMKLQG TVAQYKKLDE AIRTGRFVRN SIIKAWIDGQ IKSRNDAYRY CKLLSDNPSF
     PWVNKLNSMA RQAQAERAWA SIERFYQKCR QKIPGKKGFP KFKKYQVRAS VEYKTSGWKL
     SEDRGYLTFS DKFQAGTFKL WVSRDLHFYQ LKQIKRVRVI RRHDGYYAQF LIDHTREENK
     ELSNKQTGLD VGLNHFYTDS FGSQVENPRF LRKDERRIKK LQRRLSRTKK GSQNRKKARN
     RLGRKYLKVS RRRNDWVCKL AQQVIQSNDL VAIENLRIRN LVKNHHLAKS INDAGWYRFR
     EWLEYFGRIY GVTVIAVEPA YTSQNCSNCG EKVVKTLSTR THICPHCGYV ADRDENAAKN
     ILKSALKQLS NTVGQMEINA FGETDLCLSG ETQLSKSTHR KRKPKQ
//
DBGET integrated database retrieval system