ID A0A0K3CFC3_RHOTO Unreviewed; 545 AA.
AC A0A0K3CFC3;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=BY PROTMAP: gi|472583956|gb|EMS21572.1| DNA ligase [Rhodosporidium toruloides NP11] {ECO:0000313|EMBL:CTR05891.1};
GN Name=FGENESH: predicted gene_3.203 {ECO:0000313|EMBL:CTR05891.1};
GN ORFNames=AAT19DRAFT_12972 {ECO:0000313|EMBL:PRQ75950.1},
GN BN2166_0017520 {ECO:0000313|EMBL:CTR05891.1};
OS Rhodotorula toruloides (Yeast) (Rhodosporidium toruloides).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX NCBI_TaxID=5286 {ECO:0000313|EMBL:CTR05891.1, ECO:0000313|Proteomes:UP000199069};
RN [1] {ECO:0000313|EMBL:CTR05891.1, ECO:0000313|Proteomes:UP000199069}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Single colony {ECO:0000313|EMBL:CTR05891.1};
RA Cajimat M.N.B., Milazzo M.L., Fulhorst C.F.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:PRQ75950.1, ECO:0000313|Proteomes:UP000239560}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 0880 {ECO:0000313|EMBL:PRQ75950.1,
RC ECO:0000313|Proteomes:UP000239560};
RX PubMed=29521624;
RA Coradetti S.T., Pinel D., Geiselman G., Ito M., Mondo S., Reilly M.C.,
RA Cheng Y.F., Bauer S., Grigoriev I., Gladden J.M., Simmons B.A., Brem R.,
RA Arkin A.P., Skerker J.M.;
RT "Functional genomics of lipid metabolism in the oleaginous yeast
RT Rhodosporidium toruloides.";
RL Elife 7:0-0(2018).
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DR EMBL; CWKI01000003; CTR05891.1; -; Genomic_DNA.
DR EMBL; LCTV02000003; PRQ75950.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0K3CFC3; -.
DR STRING; 5286.A0A0K3CFC3; -.
DR OMA; HENARCG; -.
DR OrthoDB; 5489531at2759; -.
DR Proteomes; UP000199069; Unassembled WGS sequence.
DR Proteomes; UP000239560; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd07896; Adenylation_kDNA_ligase_like; 1.
DR CDD; cd08041; OBF_kDNA_ligase_like; 1.
DR Gene3D; 3.30.1490.70; -; 2.
DR Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR InterPro; IPR029319; DNA_ligase_OB.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR47810; DNA LIGASE; 1.
DR PANTHER; PTHR47810:SF1; DNA LIGASE B; 1.
DR Pfam; PF01068; DNA_ligase_A_M; 1.
DR Pfam; PF14743; DNA_ligase_OB_2; 1.
DR SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00333; DNA_LIGASE_A2; 1.
DR PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:CTR05891.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000199069}.
FT DOMAIN 332..479
FT /note="ATP-dependent DNA ligase family profile"
FT /evidence="ECO:0000259|PROSITE:PS50160"
FT REGION 34..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 166..240
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 192..217
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 545 AA; 60234 MW; 59D112148B7B271A CRC64;
MAALTSSRSL VRHALPKLHP RIFNARPRFP PTPLARPLHH PFPSAPLSST ARLASQEDAE
SYPDQSEMFY EAIALHRLVH AKAITDKTPL TLGGAEHMDL PEPRTSLKLR EEREVGSESS
SRSYKVKHFA PNAYLCTCLS WTMSRGRAVD VRSCKHLREI LGDEHEDARC GPGVGVSKGS
RPRKKVVNLD GADSSAPSTS KKANTKASAS NKAAASAKKA SENAGEEAVP AAKKAKRERE
GGKEVLLAKS FDLETKKQDP TGWWISEKLD GVRAFWDGKA LWSRVGYQFA APDDFLAKLP
KEHELDGELF LGRNRFDETS GLVRRVNGVD WSQIRFMVFD IPSRGDEPFE KRQEFLLSLF
PPADPSTFSS SSAAAVNPTA DETSATEVVE KEGDGIVRVL VQEKCEGWEH LMKRLEEVKN
VGGEGLMLRK PGSKYEPKRS STLLKVKTFY DAEALVVDHE PGKGRFEGML GSLVCVMEDR
KTQFKVGSGL NDERRVNPPP IGSIITYRFQ ELTQQKVPRF PTFVGERFDV AGPKDAVIAP
TTIGD
//