GenomeNet

Database: UniProt
Entry: A0A0K3CFC3_RHOTO
LinkDB: A0A0K3CFC3_RHOTO
Original site: A0A0K3CFC3_RHOTO 
ID   A0A0K3CFC3_RHOTO        Unreviewed;       545 AA.
AC   A0A0K3CFC3;
DT   11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT   11-NOV-2015, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=BY PROTMAP: gi|472583956|gb|EMS21572.1| DNA ligase [Rhodosporidium toruloides NP11] {ECO:0000313|EMBL:CTR05891.1};
GN   Name=FGENESH: predicted gene_3.203 {ECO:0000313|EMBL:CTR05891.1};
GN   ORFNames=AAT19DRAFT_12972 {ECO:0000313|EMBL:PRQ75950.1},
GN   BN2166_0017520 {ECO:0000313|EMBL:CTR05891.1};
OS   Rhodotorula toruloides (Yeast) (Rhodosporidium toruloides).
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC   Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX   NCBI_TaxID=5286 {ECO:0000313|EMBL:CTR05891.1, ECO:0000313|Proteomes:UP000199069};
RN   [1] {ECO:0000313|EMBL:CTR05891.1, ECO:0000313|Proteomes:UP000199069}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Single colony {ECO:0000313|EMBL:CTR05891.1};
RA   Cajimat M.N.B., Milazzo M.L., Fulhorst C.F.;
RL   Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:PRQ75950.1, ECO:0000313|Proteomes:UP000239560}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 0880 {ECO:0000313|EMBL:PRQ75950.1,
RC   ECO:0000313|Proteomes:UP000239560};
RX   PubMed=29521624;
RA   Coradetti S.T., Pinel D., Geiselman G., Ito M., Mondo S., Reilly M.C.,
RA   Cheng Y.F., Bauer S., Grigoriev I., Gladden J.M., Simmons B.A., Brem R.,
RA   Arkin A.P., Skerker J.M.;
RT   "Functional genomics of lipid metabolism in the oleaginous yeast
RT   Rhodosporidium toruloides.";
RL   Elife 7:0-0(2018).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CWKI01000003; CTR05891.1; -; Genomic_DNA.
DR   EMBL; LCTV02000003; PRQ75950.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0K3CFC3; -.
DR   STRING; 5286.A0A0K3CFC3; -.
DR   OMA; HENARCG; -.
DR   OrthoDB; 5489531at2759; -.
DR   Proteomes; UP000199069; Unassembled WGS sequence.
DR   Proteomes; UP000239560; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd07896; Adenylation_kDNA_ligase_like; 1.
DR   CDD; cd08041; OBF_kDNA_ligase_like; 1.
DR   Gene3D; 3.30.1490.70; -; 2.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR029319; DNA_ligase_OB.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR47810; DNA LIGASE; 1.
DR   PANTHER; PTHR47810:SF1; DNA LIGASE B; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF14743; DNA_ligase_OB_2; 1.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS00333; DNA_LIGASE_A2; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW   Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:CTR05891.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000199069}.
FT   DOMAIN          332..479
FT                   /note="ATP-dependent DNA ligase family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50160"
FT   REGION          34..58
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          166..240
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        192..217
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   545 AA;  60234 MW;  59D112148B7B271A CRC64;
     MAALTSSRSL VRHALPKLHP RIFNARPRFP PTPLARPLHH PFPSAPLSST ARLASQEDAE
     SYPDQSEMFY EAIALHRLVH AKAITDKTPL TLGGAEHMDL PEPRTSLKLR EEREVGSESS
     SRSYKVKHFA PNAYLCTCLS WTMSRGRAVD VRSCKHLREI LGDEHEDARC GPGVGVSKGS
     RPRKKVVNLD GADSSAPSTS KKANTKASAS NKAAASAKKA SENAGEEAVP AAKKAKRERE
     GGKEVLLAKS FDLETKKQDP TGWWISEKLD GVRAFWDGKA LWSRVGYQFA APDDFLAKLP
     KEHELDGELF LGRNRFDETS GLVRRVNGVD WSQIRFMVFD IPSRGDEPFE KRQEFLLSLF
     PPADPSTFSS SSAAAVNPTA DETSATEVVE KEGDGIVRVL VQEKCEGWEH LMKRLEEVKN
     VGGEGLMLRK PGSKYEPKRS STLLKVKTFY DAEALVVDHE PGKGRFEGML GSLVCVMEDR
     KTQFKVGSGL NDERRVNPPP IGSIITYRFQ ELTQQKVPRF PTFVGERFDV AGPKDAVIAP
     TTIGD
//
DBGET integrated database retrieval system