ID A0A0K3CJ91_RHOTO Unreviewed; 410 AA.
AC A0A0K3CJ91;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=BY PROTMAP: gi|472581470|gb|EMS19204.1| DNA-directed RNA polymerase II subunit RPB3 [Rhodosporidium toruloides NP11] gi|647397079|emb|CDR39847.1| RHTO0S04e10726g1_1 [Rhodosporidium toruloides] {ECO:0000313|EMBL:CTR08717.1};
GN Name=FGENESH: predicted gene_8.433 {ECO:0000313|EMBL:CTR08717.1};
GN ORFNames=BN2166_0045780 {ECO:0000313|EMBL:CTR08717.1};
OS Rhodotorula toruloides (Yeast) (Rhodosporidium toruloides).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX NCBI_TaxID=5286 {ECO:0000313|EMBL:CTR08717.1, ECO:0000313|Proteomes:UP000199069};
RN [1] {ECO:0000313|EMBL:CTR08717.1, ECO:0000313|Proteomes:UP000199069}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Single colony {ECO:0000313|EMBL:CTR08717.1};
RA Cajimat M.N.B., Milazzo M.L., Fulhorst C.F.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR EMBL; CWKI01000008; CTR08717.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0K3CJ91; -.
DR STRING; 5286.A0A0K3CJ91; -.
DR OMA; PPILICK; -.
DR Proteomes; UP000199069; Unassembled WGS sequence.
DR GO; GO:0055029; C:nuclear DNA-directed RNA polymerase complex; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd07031; RNAP_II_RPB3; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR001514; DNA-dir_RNA_pol_30-40kDasu_CS.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF2; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
DR PROSITE; PS00446; RNA_POL_D_30KD; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:CTR08717.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000199069};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 33..281
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT REGION 221..242
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..410
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 221..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 410 AA; 42851 MW; ED5F687E52052585 CRC64;
MQGMPVGELP MQPPATYDGA DLRVKITELK GDRCHFILDG VHLGLANSLR RSMISRIDTL
AIDQVQIHEN SSVLPDEMLA HRLGMVPLNS EGMEKQILNY NKECDCDQYC PKCSVVLTLS
AKCVSSSTME VTTKDLLLEG GISDVGKPAT NPDPKLQDGI LLAKLAKGQE INLRCIAVKG
RALEHAKWSP VAAVGFEYDP YNKLKHTDLW FEVGTDPKDE WPVSENGKYE KKPEDTDPFP
YNEKPSRFYY DVEAVGQLKP EEIVTKGLDA LILQMGQLRQ GLLDLTNQGG PGPMHPGDGG
QDGMMMDAGP VFGVGDGGYA GAPATAGAYG GAPGYGGGGG YGGATPGGMG GQGYGPPPVP
AYGASPAHFA NQGGAGGYGQ PGGGRTPGYG GANGAQGGGG GGGGWGDDPW
//
