ID A0A0K9PBB2_ZOSMR Unreviewed; 814 AA.
AC A0A0K9PBB2;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 22-FEB-2023, entry version 23.
DE RecName: Full=Pre-rRNA-processing protein RIX1 N-terminal domain-containing protein {ECO:0000259|Pfam:PF08167};
GN ORFNames=ZOSMA_2G02540 {ECO:0000313|EMBL:KMZ66244.1};
OS Zostera marina (Eelgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Zosteraceae; Zostera.
OX NCBI_TaxID=29655 {ECO:0000313|EMBL:KMZ66244.1, ECO:0000313|Proteomes:UP000036987};
RN [1] {ECO:0000313|Proteomes:UP000036987}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Finnish {ECO:0000313|Proteomes:UP000036987};
RX PubMed=26814964; DOI=10.1038/nature16548;
RA Olsen J.L., Rouze P., Verhelst B., Lin Y.-C., Bayer T., Collen J.,
RA Dattolo E., De Paoli E., Dittami S., Maumus F., Michel G., Kersting A.,
RA Lauritano C., Lohaus R., Toepel M., Tonon T., Vanneste K., Amirebrahimi M.,
RA Brakel J., Bostroem C., Chovatia M., Grimwood J., Jenkins J.W.,
RA Jueterbock A., Mraz A., Stam W.T., Tice H., Bornberg-Bauer E., Green P.J.,
RA Pearson G.A., Procaccini G., Duarte C.M., Schmutz J., Reusch T.B.H.,
RA Van de Peer Y.;
RT "The genome of the seagrass Zostera marina reveals angiosperm adaptation to
RT the sea.";
RL Nature 530:331-335(2016).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RIX1/PELP1 family.
CC {ECO:0000256|ARBA:ARBA00010511}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMZ66244.1}.
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DR EMBL; LFYR01000981; KMZ66244.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0K9PBB2; -.
DR STRING; 29655.A0A0K9PBB2; -.
DR OMA; VHMRTEN; -.
DR OrthoDB; 372185at2759; -.
DR Proteomes; UP000036987; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012583; RIX1_N.
DR PANTHER; PTHR34105; PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1; 1.
DR PANTHER; PTHR34105:SF1; PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1; 1.
DR Pfam; PF08167; RIX1; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000036987}.
FT DOMAIN 19..213
FT /note="Pre-rRNA-processing protein RIX1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08167"
FT REGION 790..814
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 814 AA; 89885 MW; DAB021608B2F0996 CRC64;
MMYQRPPVLL RMQIRDHLPN DKTSVNFSHL LSAVSAIKSH GLLRESVSSK DNPKLAKSWK
DEFDTWIDHV LSLVSSTMPD KQLAGISLLG ITCVECSSYR FLVSYSVWFQ RLYEIIQNPN
YSHFIGVALC ASFSDLLTRL ADFPKLKKDA TSLTAKIIQS VVHMLDNDTI SADSLWVGAI
RLLCTTVTFF PSTINRYYDR VEVSIVSKIM SGKYSTHVSK ELAHCLALLP KARGGVENWS
LMMQRVLIAI NTLLDDAFDG LNEGNKSSHI SRFLVPPGKV PPSPLGGHAI PKEESFVKRV
QDLLVPRVFA LTQCACTMLT ASYSVQVVIP IHPLLAIIER VLLVDGSFTS LPESPMFTTS
LHQELLCSEI PSLQLHILDL LIAVIKGVRS QLLPFAARIA RLLKEYIRSA TFPHIRIKLY
AIMQTLVISM GAGMVEYLSQ EIVENVFADL SHVTSGLDRF PLKNDVSEDD VCFLLSTNHK
KRKHDDGLST KQQISVEKSP ALLSVQLAAI EALSVILTMG GSLINSLNWR SSVDNLLITV
ATKAIDGEIN FSVTDESTPK FADLRLAALQ ALKVSLLSPG CVRPRYLYKG LEVFRRGKRE
TGTKIAAVCA DALLSLEVLI HPRALQAIDL QLQNNTAFVR GHPDHVFLPN RKSAAQPESN
ILNLVAKADD WMVDGDIECE VKDDNERTTS HGENMDLFSA SDRITLQDEL AVQNGISNQL
QKMVYSSDVQ SLDEKMLCEA PLNDADVASD HTVPRIEGIA APTSSTMDSD CAGDDRPGCS
ALLSVVHEDS HYDTDSDSDS LGFPMIENIE SESD
//
