ID A0A0L0K0S0_9ACTN Unreviewed; 613 AA.
AC A0A0L0K0S0;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KND31436.1};
GN ORFNames=IQ63_26700 {ECO:0000313|EMBL:KND31436.1};
OS Streptomyces acidiscabies.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=42234 {ECO:0000313|EMBL:KND31436.1, ECO:0000313|Proteomes:UP000037151};
RN [1] {ECO:0000313|Proteomes:UP000037151}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCPPB 4445 {ECO:0000313|Proteomes:UP000037151};
RA Harrison J., Sapp M., Thwaites R., Studholme D.J.;
RT "Genome sequencing of plant-pathogenic Streptomyces species.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KND31436.1}.
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DR EMBL; JPPY01000150; KND31436.1; -; Genomic_DNA.
DR RefSeq; WP_050372879.1; NZ_KQ257825.1.
DR AlphaFoldDB; A0A0L0K0S0; -.
DR PATRIC; fig|42234.21.peg.5508; -.
DR OrthoDB; 4990598at2; -.
DR Proteomes; UP000037151; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 2.60.120.1060; NPCBM/NEW2 domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR013222; Glyco_hyd_98_carb-bd.
DR InterPro; IPR038637; NPCBM_sf.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF58; BLL3014 PROTEIN; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF08305; NPCBM; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR PRINTS; PR01217; PRICHEXTENSN.
DR SMART; SM00776; NPCBM; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000037151};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 469..612
FT /note="Glycosyl hydrolase family 98 putative carbohydrate-
FT binding module"
FT /evidence="ECO:0000259|SMART:SM00776"
FT REGION 1..41
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 376..474
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 418..474
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 64244 MW; C35F472C60759FC2 CRC64;
MSVDGRDESQ GGDTGELDAP QVPPQRDRRD DSLLPPLREL PPADTELIAS MRAGDDSAYE
ELYRRHADAV RRYARTCCRD GHTADDLTAE VFARMLQAVR GGSGPEYAVR AYLLTSVRRV
AAQWIQSAKR EQLVDDFAVF ATQAAGRASE VGDDDTLELG ADVRAMHEAE QSMAMQAFRS
LPERWQAVLW HTEVEDESPS EVATLFGLDA NGTRVLASRA REGLKQAYLQ AHVSATLTSD
EECSQYADQL GTYARKRLRT RAERGLRKHL EECAKCRLAA LQIEEVASGI PAVVPVAVIG
WFGAAGYAKA AALIAGGVGA GAAGVGGAAA AANGGSASGG AAASEGLGAP VKAGIAAGVV
AVAAAAVALA LVGNDSPAKT PAAPAPSSAP VVREEVTPSP SPSKKPPVVV APVAPVVSVK
PSPKPSPKPS AKPSVKPSPA PVVPRPPAPS PTPSAKPSPT PTPTPTPPPA PAVYPLNELA
YNANGDGTGP EIRLFESDWV WQRDNLSIAG QPYSGVTVRA GSSVTVDLNR TCTSYDALVG
IDDTTLRLGQ AYFAVYADGV RLWRSGLVKG GDPAVPVHVD LTGRKTVRLV VEPYTRFDEL
ALVDWAESRF RCG
//
