ID A0A0L1KCJ2_9EUGL Unreviewed; 800 AA.
AC A0A0L1KCJ2;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=XU18_5133 {ECO:0000313|EMBL:KNH01765.1};
OS Perkinsela sp. CCAP 1560/4.
OC Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Prokinetoplastina;
OC Ichthyobodonidae; Perkinsela.
OX NCBI_TaxID=1314962 {ECO:0000313|EMBL:KNH01765.1, ECO:0000313|Proteomes:UP000036983};
RN [1] {ECO:0000313|EMBL:KNH01765.1, ECO:0000313|Proteomes:UP000036983}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1560/4 {ECO:0000313|EMBL:KNH01765.1};
RA Tanifuji G., David V., Flegontov P., Gerasimov E., Hashimi H.,
RA Logacheva M., Maruyama S., Onodera N., Gray M., Archibald J., Curtis B.,
RA Cenci U., Lukes J.;
RT "Draft genomes of Paramoeba pemaquidensis and its kinetoplastid
RT endosymbiont Perkinsela sp. CCAP 1560/4.";
RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KNH01765.1}.
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DR EMBL; LFNC01000585; KNH01765.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0L1KCJ2; -.
DR EnsemblProtists; KNH01765; KNH01765; XU18_5133.
DR OrthoDB; 5488182at2759; -.
DR Proteomes; UP000036983; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:KNH01765.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000036983}.
FT DOMAIN 175..344
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 370..542
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 63..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 70..95
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 800 AA; 90414 MW; BD30AA8C41179B51 CRC64;
MDWQSERLSS RKRYLDKTVP RLIREEEAYA EYLKSELKNN TALTTLEKAQ MEQDIRMVEE
VQRLKQGVGS RPKIDGEDDS RSQAHQRSDS RRTQYEFESR KLAAAGAQLH EKSLEPNYGV
IERIMESDRE YVAQATTIEP PPATYPEEVR KSDKSTSMRD FRMSLPIYTY RPTIMETLKQ
DKMLVLVGDT GSGKSTQIPQ YLLEDGYSAK REKRIVCTQP RRVAAISLAA RVATECGTAL
GGTVGYKVRF DEKISQRTEI VYMTDGMLLR EYAGDPMLSS ISAVIIDEAH ERGIHTDVLL
GLLRETFRSR LNTDDPLYLL VASATLHARK FTEYLGNAPI LHVKGRVFPI SVYYAQRTPS
DYVHAAAETA LKLHLNEGDG DILIFLTGQD EIEACEREIR ARIDKVGHLV REAILLPLYA
ALSSVQQKKI FYPTPAGARK IVIATNIAET SLTIDGIVYV IDCGVCKMKW FDPSTDTERL
VVVPISKAAA DQRKGRCGRT QPGKCYRLYT KQTYQETLQA VVVPEIQRTN IAHIVLELKA
LGIENFLDFE FLDPPDENYI LQAFATLYSL KALSDDGSLT ADGEKMSQFP LEPKLSKCIV
RSGELGCAHQ LASIAAIFAV SEGGVFVTPH GDHLRQQARR IQEEYRSMAD DTRMLLDIFE
SWSASGYTEE WCASHFVSYR ILHRAYHVRS QLLQILEKNG IPIQSTKDSR CIAQSIASGF
YNNIAVLSPF GTFYTRLKGK EEIHVHPSSA LSKKRNLPKF VLFNTLRTSS KDFMINCTVV
QPEWVIAELP HLFSKPDFEK
//