ID A0A0L8HPC9_OCTBM Unreviewed; 572 AA.
AC A0A0L8HPC9;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN ORFNames=OCBIM_22009848mg {ECO:0000313|EMBL:KOF91086.1};
OS Octopus bimaculoides (California two-spotted octopus).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda;
OC Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus.
OX NCBI_TaxID=37653 {ECO:0000313|EMBL:KOF91086.1};
RN [1] {ECO:0000313|EMBL:KOF91086.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=UCB-OBI-ISO-001 {ECO:0000313|EMBL:KOF91086.1};
RC TISSUE=Gonad {ECO:0000313|EMBL:KOF91086.1};
RA Tran T., Druce J.;
RT "MeaNS - Measles Nucleotide Surveillance Program.";
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; KQ417620; KOF91086.1; -; Genomic_DNA.
DR RefSeq; XP_014770607.1; XM_014915121.1.
DR AlphaFoldDB; A0A0L8HPC9; -.
DR STRING; 37653.A0A0L8HPC9; -.
DR EnsemblMetazoa; Ocbimv22009848m; Ocbimv22009848m.p; Ocbimv22009848m.g.
DR EnsemblMetazoa; XM_014915121.1; XP_014770607.1; LOC106869398.
DR GeneID; 106869398; -.
DR KEGG; obi:106869398; -.
DR OMA; VMTEAKP; -.
DR OrthoDB; 4793at2759; -.
DR GO; GO:0070449; C:elongin complex; IEA:InterPro.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 6.10.250.3180; -; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR010684; RNA_pol_II_trans_fac_SIII_A.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR15141; TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3; 1.
DR PANTHER; PTHR15141:SF76; TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3; 1.
DR Pfam; PF06881; Elongin_A; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}.
FT DOMAIN 5..80
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 81..297
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..106
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 120..140
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 141..160
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..216
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 239..257
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 572 AA; 64439 MW; 55163681C9A13933 CRC64;
MADINAQQKL MKCRAYLEGN PTDVKLLYIF NKLLRFPVTI DILQMTGIGK AVNSFRKREG
EIGEKARAVV TLWKSLVSKQ ENNLTDKRSV SSSSSPYNST STEQSGKTSS DDEKTTPCRT
KRQSSPQSSP QSSPQPRSST KECDKTSENI KERKKHQSSK SNSETSQSPE KKNKTASDSS
KEHHHSSKSK SESESKTKVK KSQNLKGKKK SAEDGLSFED FMNYDDSSMK KKFKKRKHDK
DDSSKSSKER KELNSSKVSS KSHSSKSSSS SCLQLSKKSK EPKSSTSQVL HVPSASKELL
PSESEILSSL PETQAHYHPW RLSDANKVER KAVTNSGDDL DSVLIGIKSR TRECVYSGKK
AALKEVPTLF SACIQVLIEN IDGLEYVGGI PFQILQPVLE RCTVSQLYTL EDYNPHFLED
SDKLWKIHCQ RKFRGYEPDE MESWREMYLR KFDEREAKLK VVKASISASM SKVTPERTVK
MAFVEAPAKP PREVRRKQLK YGTGTITKDA LGPYRTYKPV VNNKLQAPTA ASHISAGPSS
ARIQVSQQHR TTKVIAPMMQ KTMKMIKKMQ RR
//
