GenomeNet

Database: UniProt
Entry: A0A0L9TRI0_PHAAN
LinkDB: A0A0L9TRI0_PHAAN
Original site: A0A0L9TRI0_PHAAN 
ID   A0A0L9TRI0_PHAAN        Unreviewed;       290 AA.
AC   A0A0L9TRI0;
DT   11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT   11-NOV-2015, sequence version 1.
DT   22-FEB-2023, entry version 24.
DE   RecName: Full=MBD domain-containing protein {ECO:0000259|PROSITE:PS50982};
DE   Flags: Fragment;
GN   ORFNames=LR48_Vigan01g257800 {ECO:0000313|EMBL:KOM33022.1};
OS   Phaseolus angularis (Azuki bean) (Vigna angularis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX   NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM33022.1, ECO:0000313|Proteomes:UP000053144};
RN   [1] {ECO:0000313|Proteomes:UP000053144}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX   PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA   Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y., Sun Y.,
RA   Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C., Ma Y., Wu B.,
RA   Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W., Li Y., Wang J.,
RA   Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT   "Genome sequencing of adzuki bean (Vigna angularis) provides insight into
RT   high starch and low fat accumulation and domestication.";
RL   Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; CM003371; KOM33022.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0L9TRI0; -.
DR   STRING; 3914.A0A0L9TRI0; -.
DR   EnsemblPlants; KOM33022; KOM33022; LR48_Vigan01g257800.
DR   Gramene; KOM33022; KOM33022; LR48_Vigan01g257800.
DR   OMA; DGKESTH; -.
DR   Proteomes; UP000053144; Chromosome 1.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   InterPro; IPR016177; DNA-bd_dom_sf.
DR   InterPro; IPR039622; MBD10/11.
DR   InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR   PANTHER; PTHR33729; METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR   PANTHER; PTHR33729:SF6; METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11; 1.
DR   Pfam; PF01429; MBD; 1.
DR   SUPFAM; SSF54171; DNA-binding domain; 1.
DR   PROSITE; PS50982; MBD; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053144};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          1..54
FT                   /note="MBD"
FT                   /evidence="ECO:0000259|PROSITE:PS50982"
FT   REGION          35..290
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        70..283
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:KOM33022.1"
SQ   SEQUENCE   290 AA;  33067 MW;  06126798176978A4 CRC64;
     QFFPKKYGTP KKNEIVFTAP TGEEIHNRKQ LEQYLKAHPD GPAVSEFDWG TGETPRRSAR
     ISEKVKTTPP PEYEPPKKRG KKSPALKKEA SQEDEKDETK EVQMEEADET KDHKDLEQEK
     NVVEENQDEK RAENTDGKES THPGENTDKP KDDENFKIAD AEVHASKEKL EDKVVEGSEV
     VQSKDEEKIE QPLEETKKDD GTDEKKVELE GENKEEHNKG TQVSQVKDEE KVGQPLEESK
     KDDETNEKKV ELEGENKVEH NKGTQVNDEA HFKVHDINKK AESELTENGS
//
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