GenomeNet

Database: UniProt
Entry: A0A0L9VAV7_PHAAN
LinkDB: A0A0L9VAV7_PHAAN
Original site: A0A0L9VAV7_PHAAN 
ID   A0A0L9VAV7_PHAAN        Unreviewed;       861 AA.
AC   A0A0L9VAV7;
DT   11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT   11-NOV-2015, sequence version 1.
DT   27-MAR-2024, entry version 34.
DE   RecName: Full=MI domain-containing protein {ECO:0000259|PROSITE:PS51366};
GN   ORFNames=HKW66_Vig0180480 {ECO:0000313|EMBL:KAG2394574.1},
GN   LR48_Vigan09g079700 {ECO:0000313|EMBL:KOM52138.1};
OS   Phaseolus angularis (Azuki bean) (Vigna angularis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX   NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM52138.1, ECO:0000313|Proteomes:UP000053144};
RN   [1] {ECO:0000313|Proteomes:UP000053144}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX   PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA   Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y., Sun Y.,
RA   Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C., Ma Y., Wu B.,
RA   Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W., Li Y., Wang J.,
RA   Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT   "Genome sequencing of adzuki bean (Vigna angularis) provides insight into
RT   high starch and low fat accumulation and domestication.";
RL   Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
RN   [2] {ECO:0000313|EMBL:KOM52138.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:KOM52138.1};
RA   Chooi Y.-H.;
RL   Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:KAG2394574.1, ECO:0000313|Proteomes:UP000743370}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAG2394574.1};
RA   Xiang H.;
RT   "Vigna angularis (adzuki bean) Var. LongXiaoDou No. 4 denovo assembly.";
RL   Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the CWC22 family.
CC       {ECO:0000256|ARBA:ARBA00006856}.
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DR   EMBL; JABFOF010000006; KAG2394574.1; -; Genomic_DNA.
DR   EMBL; CM003379; KOM52138.1; -; Genomic_DNA.
DR   RefSeq; XP_017436591.1; XM_017581102.1.
DR   AlphaFoldDB; A0A0L9VAV7; -.
DR   STRING; 3914.A0A0L9VAV7; -.
DR   EnsemblPlants; KOM52138; KOM52138; LR48_Vigan09g079700.
DR   GeneID; 108343059; -.
DR   Gramene; KOM52138; KOM52138; LR48_Vigan09g079700.
DR   KEGG; var:108343059; -.
DR   OMA; ILTEDMR; -.
DR   OrthoDB; 1115942at2759; -.
DR   Proteomes; UP000053144; Chromosome 9.
DR   Proteomes; UP000743370; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   Gene3D; 1.25.40.180; -; 1.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR003891; Initiation_fac_eIF4g_MI.
DR   InterPro; IPR003890; MIF4G-like_typ-3.
DR   PANTHER; PTHR18034; CELL CYCLE CONTROL PROTEIN CWF22-RELATED; 1.
DR   PANTHER; PTHR18034:SF3; PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG; 1.
DR   Pfam; PF02847; MA3; 1.
DR   Pfam; PF02854; MIF4G; 1.
DR   SMART; SM00544; MA3; 1.
DR   SMART; SM00543; MIF4G; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
DR   PROSITE; PS51366; MI; 1.
PE   3: Inferred from homology;
KW   Initiation factor {ECO:0000256|ARBA:ARBA00022540};
KW   Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053144};
KW   Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT   DOMAIN          610..726
FT                   /note="MI"
FT                   /evidence="ECO:0000259|PROSITE:PS51366"
FT   REGION          1..288
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          564..604
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          812..861
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..261
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        262..285
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        570..600
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        812..842
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   861 AA;  99497 MW;  3A2967AB8ABC964B CRC64;
     MARRRSSSSE SSEDDVRRRS GCESEDEERD RYRRGGRSGR KSSGHRRDNS DGSNSGEERN
     RAERDGVMGS DKKSRSRERK EKSESSEEEG QIVNKKRVSE EKGEDERLPQ DYDGRGRRDA
     EEDSRGDRAS RRVNGQSERR GEKESHRLHH RDRWRGGEEG KSRIVDRRGR HDSEEDHIEL
     TRKSDGYSDR DKRRKVEKGG NRHSRYDSEE DDRELARKSE RDSDRRRRRP ERDDDNERNH
     RDKGVSKQQE ESRKKENGNG RTVRDANPQR QTTIPGGNLN GDASNLGKSG GVYIPPFKMA
     MMMKEVQDKS SVEYQRLTWD ALRKSINGLV NKVNATNIKN IIPELFSENL IRGRGLFCRS
     CMKSQMASPG FTDVFAALVA VVNTKFPEVG DLLLRRIVLQ LKRAYKRNDK PQLLAAVKFI
     GHLVNQQVAH EIIALELLTV LLEKPTDDSV EVAVGFVTEC GSILQDLSPK GLHGIFERFR
     GILHEGEIDK RVQFLIEGLF AIRKAKFQGY PAVRPELDLV EQEDQLTHEV SLDEEIDPEI
     SLDIFKPDPN FLENEKRYEE LKKSMLGEES EDEEEGMDAE SDDEDEEDES DEEDEEQMQI
     KDETETNLVN LRRTIYLTIM SSVDFEEAGH KLLKIKLEPG QEMELCIMLL ECCSQERTYL
     RYYGLLGQRF CMINKVHQEN FEKCFVQQYS MIHRLETNKL RNVAKFFAHL LGTDALPWHV
     LSYIRLTEED TTSSSRIFIK ILFQELSEHL GIRLLNERLN DPTMQESFES IFPKDNPKNT
     RFCINFFTSI GLGGLTENLR EYLKNMPRLI MQQQKQVSES ESDDESGSSA SSDSGSSDSD
     STSSDESDAE HDRRQRKRRR K
//
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