GenomeNet

Database: UniProt
Entry: A0A0L9VDL2_PHAAN
LinkDB: A0A0L9VDL2_PHAAN
Original site: A0A0L9VDL2_PHAAN 
ID   A0A0L9VDL2_PHAAN        Unreviewed;      1384 AA.
AC   A0A0L9VDL2;
DT   11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT   11-NOV-2015, sequence version 1.
DT   31-JUL-2019, entry version 23.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KOM53151.1};
GN   ORFNames=LR48_Vigan09g181000 {ECO:0000313|EMBL:KOM53151.1};
OS   Phaseolus angularis (Azuki bean) (Vigna angularis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
OC   50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
OC   Phaseoleae; Vigna.
OX   NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM53151.1, ECO:0000313|Proteomes:UP000053144};
RN   [1] {ECO:0000313|Proteomes:UP000053144}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX   PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA   Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y.,
RA   Sun Y., Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C.,
RA   Ma Y., Wu B., Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W.,
RA   Li Y., Wang J., Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT   "Genome sequencing of adzuki bean (Vigna angularis) provides insight
RT   into high starch and low fat accumulation and domestication.";
RL   Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
CC   -!- SIMILARITY: Belongs to the helicase family. Dicer subfamily.
CC       {ECO:0000256|PROSITE-ProRule:PRU00657}.
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DR   EMBL; CM003379; KOM53151.1; -; Genomic_DNA.
DR   RefSeq; XP_017436102.1; XM_017580613.1.
DR   EnsemblPlants; KOM53151; KOM53151; LR48_Vigan09g181000.
DR   GeneID; 108342804; -.
DR   Gramene; KOM53151; KOM53151; LR48_Vigan09g181000.
DR   KEGG; var:108342804; -.
DR   KO; K11592; -.
DR   OrthoDB; 1337630at2759; -.
DR   Proteomes; UP000053144; Chromosome 9.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd00593; RIBOc; 2.
DR   Gene3D; 1.10.1520.10; -; 2.
DR   Gene3D; 3.30.160.380; -; 1.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR038248; Dicer_dimer_sf.
DR   InterPro; IPR005034; Dicer_dimerisation_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003100; PAZ_dom.
DR   InterPro; IPR036085; PAZ_dom_sf.
DR   InterPro; IPR000999; RNase_III_dom.
DR   InterPro; IPR036389; RNase_III_sf.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF03368; Dicer_dimer; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF02170; PAZ; 1.
DR   Pfam; PF00636; Ribonuclease_3; 2.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00949; PAZ; 1.
DR   SMART; SM00535; RIBOc; 2.
DR   SUPFAM; SSF101690; SSF101690; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   SUPFAM; SSF69065; SSF69065; 2.
DR   PROSITE; PS51327; DICER_DSRBF; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50821; PAZ; 1.
DR   PROSITE; PS00517; RNASE_3_1; 1.
DR   PROSITE; PS50142; RNASE_3_2; 2.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000053144};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053144};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657};
KW   RNA-mediated gene silencing {ECO:0000256|SAAS:SAAS00703041}.
FT   DOMAIN       33    212       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      376    540       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   DOMAIN      561    643       Dicer dsRNA-binding fold.
FT                                {ECO:0000259|PROSITE:PS51327}.
FT   DOMAIN      825    926       PAZ. {ECO:0000259|PROSITE:PS50821}.
FT   DOMAIN      943   1107       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   DOMAIN     1143   1290       RNase III. {ECO:0000259|PROSITE:PS50142}.
SQ   SEQUENCE   1384 AA;  157220 MW;  8E5020183075C804 CRC64;
     MEEALVGDVI DNTQQQNNTR DVLPFARSYQ LEALDNALRE NTIVYLETGS GKTLIAIMLL
     RSYAHHLRKP SSSIAVFLVP QVVLVSQQSE VVKKHTDLKV GTYWGAMGVD FWDAAMWKQE
     VEKHEVLVMT PAILLSCLRH SFLKLNMIKV LIMDECHHAR GKHPYACIMT EFYHHQLNLG
     VTDLPRIFGM TASPIKSKVG NSELSWSENI RTLITLMHSK VYTCVSEAVL AEFMPSSTPK
     FKFYRDSGIQ FALFEDLALK LKILKEQHGS TLRSSDFTKS AAESAEKRIA KIFCALMFCL
     DELGVWLTLK AAESLSSNEF ESFSWGHCGD TVVKNFILAC VQTLKTYLPC GPQWSIGNNI
     KSDVEMGLLT TKVCCLIDSL LEYRGLTDIR CIIFVQRVVT AIVLQDLLNT LLPTINNWKT
     KFIAGHKYRL QNQSRKEQNK IVEEFHLGLV NIIVATSILE EGLDVQTCNL VIRFDPSPTV
     CSFIQSRGRA RMKNSDYLLI VKSGDSATCS RLEKYLASGD IMRKEALRYS SLPCDPFEGD
     QFDEETYRVA NTDAFANLSS SISLIHLYCS RLPADGYFKP APRWDKETAT LYLPKSCPLK
     PIHVEGDKNL LKNIACLEAC KQLHKIGALT DNLVPDIVIE EAEMEEFGNE HYDENQPIYA
     PFELVNYVPN SSHTTYHCYL MEFSQKFCYH TSVQDLFLAL RIKLDPEIGC MQFDMDFDRG
     SVSVKLSYKG TINLSLDQVL LCKKFQVTLL RILIDNCMDK FTTGLDKCFL KDDLEIDYLL
     LPATGKHPNS KIDWLIVNSV NPSNIRCKYH QPHISTKSGL VCTCKLQNAL VCTSHAAGKI
     YFYITTGVME LDTNSPMILR NGEITTYKKY FDQYHGIQLQ FEHQRLLKAK HKFQVKNHCH
     GLRERKEREA SHSFVELPPE LCSIVMSPIT DGVIYSFSFI PSIMHRLESL LSAFNLKKMY
     SDHCTENEIQ TTKVLEAITT KGCKEAFHYE SLETLGDSFL KYAASQLLFK TYQNHHEGLL
     SVKREKIISN TALCKLGCNS GLAGFIRNAP FDPNVWIIPG DYSRTFKYTE LITKGKKNYV
     YGKRKLKRKI IADVVEALIG AFLSTGGEKA ALMFMDWVGI KVSFDKIAYD RHFDIQPEKL
     VNVEFLESKL KYSFHDRSLL VEALTHGSYM LPEVPRCYQR LEFLGDSVLD YLITWYLYNK
     YPGMSPGQLT DMRSASVNND CYAWSTIKHG LHKHVLHASQ ELHMHIAVTL DNFEKLSSSS
     TFGYECETSL PKVLGDILEA LAGAILVDSG YNKEVVWQSI KPLLEPLVTP ETLKLHPIRE
     FYEVCQKKSY KIIQDVVSSK GGVTNYRMEV EADGVIHEYE YIGAVLKDTA KKIVCKELLN
     SLKK
//
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