ID A0A0L9VPR2_PHAAN Unreviewed; 236 AA.
AC A0A0L9VPR2;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=DNA-directed RNA polymerase III subunit RPC6 {ECO:0008006|Google:ProtNLM};
GN ORFNames=HKW66_Vig0168350 {ECO:0000313|EMBL:KAG2380056.1},
GN LR48_Vigan11g006700 {ECO:0000313|EMBL:KOM57035.1};
OS Phaseolus angularis (Azuki bean) (Vigna angularis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM57035.1, ECO:0000313|Proteomes:UP000053144};
RN [1] {ECO:0000313|Proteomes:UP000053144}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y., Sun Y.,
RA Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C., Ma Y., Wu B.,
RA Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W., Li Y., Wang J.,
RA Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT "Genome sequencing of adzuki bean (Vigna angularis) provides insight into
RT high starch and low fat accumulation and domestication.";
RL Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
RN [2] {ECO:0000313|EMBL:KOM57035.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:KOM57035.1};
RA Chooi Y.-H.;
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAG2380056.1, ECO:0000313|Proteomes:UP000743370}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KAG2380056.1};
RA Xiang H.;
RT "Vigna angularis (adzuki bean) Var. LongXiaoDou No. 4 denovo assembly.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPC34/RPC39 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00011038}.
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DR EMBL; JABFOF010000009; KAG2380056.1; -; Genomic_DNA.
DR EMBL; CM003381; KOM57035.1; -; Genomic_DNA.
DR RefSeq; XP_017442649.1; XM_017587160.1.
DR AlphaFoldDB; A0A0L9VPR2; -.
DR STRING; 3914.A0A0L9VPR2; -.
DR EnsemblPlants; KOM57035; KOM57035; LR48_Vigan11g006700.
DR GeneID; 108347731; -.
DR Gramene; KOM57035; KOM57035; LR48_Vigan11g006700.
DR KEGG; var:108347731; -.
DR OMA; EASIPCI; -.
DR OrthoDB; 930780at2759; -.
DR Proteomes; UP000053144; Chromosome 11.
DR Proteomes; UP000743370; Unassembled WGS sequence.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:InterPro.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR GO; GO:0006383; P:transcription by RNA polymerase III; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR007832; RNA_pol_Rpc34.
DR InterPro; IPR016049; RNA_pol_Rpc34-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12780:SF1; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6; 1.
DR PANTHER; PTHR12780; RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED; 1.
DR Pfam; PF05158; RNA_pol_Rpc34; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000053144};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
SQ SEQUENCE 236 AA; 26331 MW; E7DDC7A27490B54A CRC64;
MSILQGKRKR QDLASALSAS MTNEERVIYN IIRGKKEMGI WQGDIKRETN IPDSILKKSI
KLLISKTLIK EVVNIQNKSK KVLMAMEFEP SKEITGGEWY TEGRLDTQLI DALSDVCLKL
ISRKKIATRD AILEWTRTLG NEVFPGGVSP GQVEQILKVL VMENKLQEVN STGFGDFSSV
PAGEVCFRLA KKVGTNVKVG AMASIPCGVC PRIKFCTPNG IISPTNCQYY QKWLDF
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