ID A0A0M9EI79_9RHOB Unreviewed; 251 AA.
AC A0A0M9EI79;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=HTH-type transcriptional regulator SrpS {ECO:0000313|EMBL:KPA21823.1};
GN Name=srpS {ECO:0000313|EMBL:KPA21823.1};
GN ORFNames=shim_17080 {ECO:0000313|EMBL:KPA21823.1};
OS Shimia sp. SK013.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=1389006 {ECO:0000313|EMBL:KPA21823.1, ECO:0000313|Proteomes:UP000037951};
RN [1] {ECO:0000313|EMBL:KPA21823.1, ECO:0000313|Proteomes:UP000037951}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SK013 {ECO:0000313|EMBL:KPA21823.1,
RC ECO:0000313|Proteomes:UP000037951};
RA Voget S., Kanukollu S., Daniel R., Engelen B.;
RT "Genome Sequence of Shimia sp. SK013.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPA21823.1}.
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DR EMBL; LAJH01000011; KPA21823.1; -; Genomic_DNA.
DR RefSeq; WP_054002204.1; NZ_LAJH01000011.1.
DR AlphaFoldDB; A0A0M9EI79; -.
DR STRING; 1389006.shim_17080; -.
DR PATRIC; fig|1389006.3.peg.1752; -.
DR OrthoDB; 6057486at2; -.
DR Proteomes; UP000037951; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000037951};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 13..75
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 69..251
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 251 AA; 26869 MW; 670465BAB368F1D5 CRC64;
MADTEDKNSR SGIQVIARAA AVLRILKDAQ TGMSLGQIAE RVGLPRSTVQ RITSALAKEN
LVIAAPQGRG LILGPEFSSL AGAAPYNIVE HCRLLLTELT HKTGETADLA VMRGIGMVFL
DQVPGTHRLT TVSQVGEVFP LTTTANGKAC LARLPREEAI PLIQNEWSRN GITGDIEAYL
LDLEKVAHEG LAYDLDEHSG GVSAIGFAFE DWAGDLHAIS VPVPSSRYDA QCGIIERALR
ETAANIQATF D
//