ID A0A0N0D877_9RHOB Unreviewed; 264 AA.
AC A0A0N0D877;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Transcriptional regulator KdgR {ECO:0000313|EMBL:KPA20668.1};
GN Name=kdgR_2 {ECO:0000313|EMBL:KPA20668.1};
GN ORFNames=shim_31210 {ECO:0000313|EMBL:KPA20668.1};
OS Shimia sp. SK013.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=1389006 {ECO:0000313|EMBL:KPA20668.1, ECO:0000313|Proteomes:UP000037951};
RN [1] {ECO:0000313|EMBL:KPA20668.1, ECO:0000313|Proteomes:UP000037951}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SK013 {ECO:0000313|EMBL:KPA20668.1,
RC ECO:0000313|Proteomes:UP000037951};
RA Voget S., Kanukollu S., Daniel R., Engelen B.;
RT "Genome Sequence of Shimia sp. SK013.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPA20668.1}.
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DR EMBL; LAJH01000017; KPA20668.1; -; Genomic_DNA.
DR RefSeq; WP_054003558.1; NZ_LAJH01000017.1.
DR AlphaFoldDB; A0A0N0D877; -.
DR STRING; 1389006.shim_31210; -.
DR PATRIC; fig|1389006.3.peg.3214; -.
DR OrthoDB; 6057486at2; -.
DR Proteomes; UP000037951; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000037951};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 4..66
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 67..250
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 264 AA; 29090 MW; 618BD154125BE210 CRC64;
MSGDGTVGKA LDVLDQVAAY KRPVRFGELQ DNSAYPKATL YRFLQTLTNQ GMLSYDADRQ
TYALGMRLVR LAHAAWTTSS LAPIARPHLD ALSAEIGETV HLAQLDASQV LYVDKRNARQ
PVEMYSQAGK VGPAYCTGVG KAMMAFLGEA ELDRAIQQQS FHRFTPTTLA SEAELRAELA
NIRARGYGFD REEHEPGIVC VAVPILTKNG RPLGALSVTG PTSRTSLEQL EDWAPRVIDT
ATRIGREAQA WRFPETRQQK VMNP
//