ID A0A0N0KDJ7_9SPHN Unreviewed; 217 AA.
AC A0A0N0KDJ7;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=HTH tetR-type domain-containing protein {ECO:0000259|PROSITE:PS50977};
GN ORFNames=IP83_01285 {ECO:0000313|EMBL:KPF89946.1};
OS Novosphingobium sp. AAP93.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1523427 {ECO:0000313|EMBL:KPF89946.1, ECO:0000313|Proteomes:UP000037906};
RN [1] {ECO:0000313|EMBL:KPF89946.1, ECO:0000313|Proteomes:UP000037906}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AAP93 {ECO:0000313|EMBL:KPF89946.1,
RC ECO:0000313|Proteomes:UP000037906};
RA Zeng Y., Feng F., Liu Y., Koblizek M.;
RT "Novel Diversity of Limnic Aerobic Anoxygenic Phototrophic Bacteria as
RT Revealed by High-throughput Strain Identification and Genome Sequencing.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPF89946.1}.
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DR EMBL; LJHZ01000003; KPF89946.1; -; Genomic_DNA.
DR RefSeq; WP_054120390.1; NZ_LJHZ01000003.1.
DR AlphaFoldDB; A0A0N0KDJ7; -.
DR STRING; 1523427.IP83_01285; -.
DR PATRIC; fig|1523427.4.peg.2201; -.
DR OrthoDB; 9816431at2; -.
DR Proteomes; UP000037906; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001647; HTH_TetR.
DR InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR InterPro; IPR039536; TetR_C_Proteobacteria.
DR PANTHER; PTHR30055; HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR; 1.
DR PANTHER; PTHR30055:SF119; TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF14246; TetR_C_7; 1.
DR Pfam; PF00440; TetR_N; 1.
DR PRINTS; PR00455; HTHTETR.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF48498; Tetracyclin repressor-like, C-terminal domain; 1.
DR PROSITE; PS50977; HTH_TETR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335}.
FT DOMAIN 18..78
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DNA_BIND 41..60
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ SEQUENCE 217 AA; 24059 MW; 19E56E9A8543245F CRC64;
MVTSDTLARG RLGRQSPDER RENILAVAAE AFALEGYGIT SMSTIAARLG GSKATLYKYF
TSKEELFQAV MQRKSQAVIG PFEELADRST DPETLLRAFG MIFLTRLCQP DALDIHRTVH
GEGQRFPEVA RTFFAYGPDA AYALLTPALE RFHHEGQIDC PDPRLAAEQF FAMVRGDIHL
RVSSGLVPPP SEAEIERQVN HAVGIFVRGI ARRDRPG
//
