ID A0A0N1EZA8_9SPHN Unreviewed; 365 AA.
AC A0A0N1EZA8;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Endonuclease DDE {ECO:0000313|EMBL:KPH66647.1};
DE SubName: Full=Putative transposase {ECO:0000313|EMBL:TCM26399.1};
GN ORFNames=ADT71_04945 {ECO:0000313|EMBL:KPH66647.1}, EDF59_13523
GN {ECO:0000313|EMBL:TCM26399.1};
OS Novosphingobium sp. ST904.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1684385 {ECO:0000313|EMBL:KPH66647.1, ECO:0000313|Proteomes:UP000037878};
RN [1] {ECO:0000313|EMBL:KPH66647.1, ECO:0000313|Proteomes:UP000037878}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ST904 {ECO:0000313|EMBL:KPH66647.1,
RC ECO:0000313|Proteomes:UP000037878};
RA Thijs S., Bottos E.M., Van Hamme J.D., Gkorezis P., Rineau F.,
RA Vangronsveld J.;
RT "Novosphingobium nitrophenolicus strain ST904 degrades p-nitrophenol and
RT stimulates plant growth.";
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:TCM26399.1, ECO:0000313|Proteomes:UP000295740}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ST904 {ECO:0000313|EMBL:TCM26399.1,
RC ECO:0000313|Proteomes:UP000295740};
RA Whitman W.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing
RT to study the core and pangenomes of soil and plant-associated
RT prokaryotes.";
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPH66647.1}.
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DR EMBL; LGJH01000115; KPH66647.1; -; Genomic_DNA.
DR EMBL; SLVC01000035; TCM26399.1; -; Genomic_DNA.
DR RefSeq; WP_007683624.1; NZ_SLVC01000035.1.
DR AlphaFoldDB; A0A0N1EZA8; -.
DR STRING; 1684385.ADT71_04945; -.
DR PATRIC; fig|1684385.3.peg.5216; -.
DR OrthoDB; 2375382at2; -.
DR Proteomes; UP000037878; Unassembled WGS sequence.
DR Proteomes; UP000295740; Unassembled WGS sequence.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR038717; Tc1-like_DDE_dom.
DR InterPro; IPR047655; Transpos_IS630-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033545; transpos_IS630; 1.
DR PANTHER; PTHR30347:SF1; MINICONDUCTANCE MECHANOSENSITIVE CHANNEL MSCM; 1.
DR PANTHER; PTHR30347; POTASSIUM CHANNEL RELATED; 1.
DR Pfam; PF13358; DDE_3; 1.
DR Pfam; PF13565; HTH_32; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Endonuclease {ECO:0000313|EMBL:KPH66647.1};
KW Hydrolase {ECO:0000313|EMBL:KPH66647.1};
KW Nuclease {ECO:0000313|EMBL:KPH66647.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000037878};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 173..315
FT /note="Tc1-like transposase DDE"
FT /evidence="ECO:0000259|Pfam:PF13358"
SQ SEQUENCE 365 AA; 41397 MW; 1ED3E83538E38777 CRC64;
MAGRRADLVV LSGDDRRFLE AQVRRHKAPR SLSDRCRMVL LCAEGLQSKE VAERLGVHEH
TVGKWRRRFV QAGIEGLTDE YRAGRPRTVS DTQVAQVIER TLNTTPKDAT HWSIRSMAAK
SGLSHTTIRR IWGAFGLQPH RSETFKLSTD PLFVDKVQDI VGLYMSPPNR AIVLCVDEKS
QIQALDREQP VLPMAPGVPE RRTHTYVRNG TTSLFAALDI ATGAVIGKCY KRHRATEFLD
FLKRIDAAIP KGPDVHLVMD NYATHKTPKI KAWLARRPHW HAHFTPTSAS WINQVERWFA
ELTRKQLQRG VHRSTAELET DITAFIAAHN ENPKPYKWVK SADEILAAVK RFCQKTMSRT
SDSGD
//
