ID A0A0N1IA99_PAPMA Unreviewed; 1719 AA.
AC A0A0N1IA99;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=Protein polybromo-1 {ECO:0000313|EMBL:KPJ19149.1};
GN ORFNames=RR48_05459 {ECO:0000313|EMBL:KPJ19149.1};
OS Papilio machaon (Old World swallowtail butterfly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea;
OC Papilionidae; Papilioninae; Papilio.
OX NCBI_TaxID=76193 {ECO:0000313|EMBL:KPJ19149.1, ECO:0000313|Proteomes:UP000053240};
RN [1] {ECO:0000313|EMBL:KPJ19149.1, ECO:0000313|Proteomes:UP000053240}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ya'a_city_454_Pm {ECO:0000313|EMBL:KPJ19149.1};
RC TISSUE=Whole body {ECO:0000313|EMBL:KPJ19149.1};
RX PubMed=26354079; DOI=10.1038/ncomms9212;
RA Li X., Fan D., Zhang W., Liu G., Zhang L., Zhao L., Fang X., Chen L.,
RA Dong Y., Chen Y., Ding Y., Zhao R., Feng M., Zhu Y., Feng Y., Jiang X.,
RA Zhu D., Xiang H., Feng X., Li S., Wang J., Zhang G., Kronforst M.R.,
RA Wang W.;
RT "Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies.";
RL Nat. Commun. 6:8212-8212(2015).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KQ459941; KPJ19149.1; -; Genomic_DNA.
DR STRING; 76193.A0A0N1IA99; -.
DR InParanoid; A0A0N1IA99; -.
DR Proteomes; UP000053240; Unassembled WGS sequence.
DR GO; GO:0016586; C:RSC-type complex; IEA:InterPro.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd04717; BAH_polybromo; 1.
DR CDD; cd05524; Bromo_polybromo_I; 1.
DR CDD; cd05517; Bromo_polybromo_II; 1.
DR CDD; cd05520; Bromo_polybromo_III; 1.
DR CDD; cd05515; Bromo_polybromo_V; 1.
DR CDD; cd05526; Bromo_polybromo_VI; 1.
DR CDD; cd21984; HMG-box_PB1; 1.
DR Gene3D; 2.30.30.490; -; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 6.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR037968; PBRM1_BD5.
DR InterPro; IPR037382; Rsc/polybromo.
DR PANTHER; PTHR16062:SF19; PROTEIN POLYBROMO-1; 1.
DR PANTHER; PTHR16062; SWI/SNF-RELATED; 1.
DR Pfam; PF01426; BAH; 2.
DR Pfam; PF00439; Bromodomain; 6.
DR Pfam; PF00505; HMG_box; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00439; BAH; 2.
DR SMART; SM00297; BROMO; 6.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47370; Bromodomain; 6.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51038; BAH; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 3.
DR PROSITE; PS50014; BROMODOMAIN_2; 5.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000053240}.
FT DOMAIN 60..130
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 200..270
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 369..439
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 530..600
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 661..731
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 921..1039
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 1118..1234
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 1367..1439
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 1367..1439
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 148..180
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 285..351
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 464..511
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 897..917
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1319..1366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1063..1090
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 285..307
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 328..342
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 464..483
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1319..1359
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1719 AA; 195888 MW; 8EA4B94C1C7F6017 CRC64;
MSKRRRASSV ASRGADGDDS DDAVELSNPG PPPSRKKKKL EPSEICQQLY DTIRSFKKED
GSLLCDSFIR APKRRQEPQY YEVVSQPIDL LRVQQKLKTD TYEDIEELSA DIELLVNNAK
AFYKPDSVEY RDAIDLWKLY TQSRQTLENG EEIKTPKVSR NGSSSRRSDV AEDLSETSTN
NEDDNIFEEL FSAVMTANVD GRPLYPQFQF LPSKRRYPEY YNVIDSPIDL KTIAQKIQAG
EYSNLTELER DLLLMVRNAC LFNEPGSQIY KDAKTLKKII QVRKQEIDQH GRGGPAKTSE
RIRSKRSSRV GPVPSSRALA IMDPLGSEAE SEVKHSDDSG GDSDDDKVDN EDTPQWKLLE
TIRNHLGPNG TPMAEPFWKL PSRREYPDYY KEIKNPMSLN QIKNKIRRGS YGTVSEVAGD
MNIMFENAKQ YNVPSSRLYK DAVKLQRLMQ QRVQELLDIV QSSSSDDESL SSVKNTQTQI
ATPRPRGRPR INPLPSSVQS PAPSLPKPNM PLKKKLHYIS KHLVEFTCSD GRQPMLLFME
KPSKKLYPEY YNVIERPIDM ITIEANIKND RYNSIDELVA DFSLMFSNCR QFNEEGSMIY
EDAILLERVM NEKLKELNSV NYEKKTPVKT CKPVKTRQLS PFEQKLRTLY GAIRDYRDPK
AYRQLALIFM KLPSKIEYPD YYELIKNPID MEKIAHKLKH GSYNSVNELA SDFILMFDNA
CKYNEPDSQI YKDALILQRV CLQTKQMLRE DEDAVPDVPA AVQDLLLTLF TSVYNHQDEE
GRCYSDSMAE LPEHDESSNG EKVRAISLDL VKRRLDKGLY KRLDHFQQDM FAVFERARRL
SRTDSQIFED SVELQTYYTE QRDLLCRGVL QSPALAFTRD AIATSVELVK QCKLLQENED
EDETRSSTDD SMPAGAAPLK TQYNKGDFVY IQPDKGNKEP SIVQVERVWT NNEGVPMMYC
NAYFRPQETF HVRTRKFLQQ EVFKTETHRA VPLDQVIGRC YVMNVKEYFK FRPEGYADKD
VYVCESRYST RYRLFKKIKV WEGAEKEVTL IPRDVPLEPN RTVSVFRERV EKHKDELAEL
EVLENIQEKD RPDVVMYNPL GTDDENTYYE QYNTVCSGVV KTGDYVYVVT DGGKQMIAQV
DTIWETGDNK CYFRGPFLIF PAEVANVINK PFYKQEVLLT TMHDTSPLVG IVGKCAVLDY
DDYLKCRPTE ISESDVFVCE SVYDESNRVA RKLKTGLRKF EHTKDVTVDE IYFFPKPLGP
PALASAQEVQ SSSTAFTQKP FNPNINIDSM DGKPQFTNLI NTTIGSQDVE MILENSLDDS
SMASPATPLS IGGNSNPYNP SMTPSASNER SNPASTPATS KKKKEQKQKI VTGYILYSSE
VRKAIVANNP ESTFGEISRI VGNEWRSLPA ATKQSWEERA ARCNEETSAR LAEEMRELAQ
HTPMEMTYEC AWDTCDYQFE DLADCMEHCI GDGGNTGHVQ LHYRALGSGA SGEYACAWRS
CARVRKGQAP FPNLPRLLRH VRDLHVNKGN GRIMAVHERS RNFVPSSKKP VKTFMTNFRS
GIMSPASLSG MSPMARNSPS PGAGVGITSS ADGAASARAG PEPIFVAAPP RAQRLTHSEA
YIRQVHTLYI EGLHSEQKYI TPWEKSLTPM PSNPDPAHFN VHKLSQWMSE DAVNGYLAYD
KSLTENDIQK MDQSTKIVKA ICVLRDYMMR DALAIYKNM
//
