ID A0A0N1ICA7_PAPMA Unreviewed; 1166 AA.
AC A0A0N1ICA7;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=CCR4-NOT transcription complex subunit 4 {ECO:0000313|EMBL:KPJ19287.1};
GN ORFNames=RR48_05929 {ECO:0000313|EMBL:KPJ19287.1};
OS Papilio machaon (Old World swallowtail butterfly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea;
OC Papilionidae; Papilioninae; Papilio.
OX NCBI_TaxID=76193 {ECO:0000313|EMBL:KPJ19287.1, ECO:0000313|Proteomes:UP000053240};
RN [1] {ECO:0000313|EMBL:KPJ19287.1, ECO:0000313|Proteomes:UP000053240}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ya'a_city_454_Pm {ECO:0000313|EMBL:KPJ19287.1};
RC TISSUE=Whole body {ECO:0000313|EMBL:KPJ19287.1};
RX PubMed=26354079; DOI=10.1038/ncomms9212;
RA Li X., Fan D., Zhang W., Liu G., Zhang L., Zhao L., Fang X., Chen L.,
RA Dong Y., Chen Y., Ding Y., Zhao R., Feng M., Zhu Y., Feng Y., Jiang X.,
RA Zhu D., Xiang H., Feng X., Li S., Wang J., Zhang G., Kronforst M.R.,
RA Wang W.;
RT "Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies.";
RL Nat. Commun. 6:8212-8212(2015).
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DR EMBL; KQ459933; KPJ19287.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0N1ICA7; -.
DR STRING; 76193.A0A0N1ICA7; -.
DR InParanoid; A0A0N1ICA7; -.
DR Proteomes; UP000053240; Unassembled WGS sequence.
DR GO; GO:0030014; C:CCR4-NOT complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR CDD; cd16618; mRING-HC-C4C4_CNOT4; 1.
DR CDD; cd12438; RRM_CNOT4; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR034261; CNOT4_RRM.
DR InterPro; IPR039780; Mot2.
DR InterPro; IPR039515; NOT4_mRING-HC-C4C4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12603; CCR4-NOT TRANSCRIPTION COMPLEX RELATED; 1.
DR PANTHER; PTHR12603:SF0; CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF14570; zf-RING_4; 2.
DR SMART; SM00361; RRM_1; 1.
DR SUPFAM; SSF57850; RING/U-box; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000053240};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 272..315
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 405..489
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 486..513
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 486..513
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..155
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 171..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 543..682
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1066..1096
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..122
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..155
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 554..626
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 633..682
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1066..1084
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1166 AA; 126482 MW; 59D67A99D319C61F CRC64;
MPGTPEPHSS LSEQRSGRFS LEQSPSFNNP QTPTSAANTK CGDEKSRPSP SSNRSSQDNA
SKTPQRESSG LNQGPYAPAS SASCVGSAKS SCSVTTAPSG NMDDTMAGSN ETTLSGGPNS
TSLPGPFPGP CSMNRPDNIP INPNQGPNGP MGTSTSSFDP ISSLAQMSQQ LTNTVGGGGP
GPTGPMGPNG SGMGPFGSGP HHMQHHHSMH PHGHPHMMMN DLVLFPTLTR EGAEEGTHTK
GKYPLSVEAT ELLAAGARMS VLNQSGEEQV ECPLCMEPLE VDDLHFYPCT CGYQICRFCW
NRIREGENGL CPACRKAYPE NPADFTPLSQ EQICRFCWNR IREGENGLCP ACRKAYPENP
ADFTPLSQEQ VAAIKTEKKA REQKRRNKTL ESRRALANVR VVQNNLVFVV GLPVRLADPE
ILKRQEYFGK YGKIHKVVIN QSTAYAGSQG PSASAYVTYV TSADALRAIQ GVNNVTLDGR
VLKGSLGTTK YCANFMKNQP CPKSDCMYLH ELGDPNASFT KEEMHAGLHQ VYERRLHNQL
LQAQRDKPDD KNCHSTGNSS TNAEKASSKD GIPSNTTPTP MVTSSNINIV TTSKSKKETA
NGNGNGKEYG SNGVGSNGNS KEAWPSLGSS PPADSPARKQ SSPKPQHSTG KSQENGTSES
SSPTQQQIQH TENHSSVFES DTQQSYLTNE LDELESDRHS LLENHDLLDN SDHSLLDDDN
THNLLNDANN VVVMMQTHRE MLAGLVDNNH ILAHNMKSPL ANGYGLLDRE TVNYLGNDRQ
ISQINHGMMD QNELMLHEQR SHNEMLLRNE MLARQHNALV EQKHYMPTSS IGLETASELL
GANFHQNHNM LPPFGMRIDN SMGSGNSISA NSLSSNSVPG SSMNTMGGYM MQHQQMLQQN
QSQMPQNNLV NGFDSPQSAA LSTIDTSPRI PLPPFIPKMV LRPAKIVEKN CLMNTLRGAG
GENCGGRAAG DGDDDLDFDP FKETQKALAE MMETEMMFNT ISSGDNMERV HRARIAPPPG
FGHLNAFGMG VPPHHQQHQG YNSNSAQNVF SDWTQMDPAI MSTSVSFGKQ PHAQSHSQPH
AQPHAQPHAQ PHAQPGLTPQ QQELFARFNQ LNVQPNGISK HQMSGAVSAA QQWGGGKLWG
AYSMPIPPGF APPPTSQHPA ECIDAK
//
