ID A0A0N4YR29_NIPBR Unreviewed; 573 AA.
AC A0A0N4YR29;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=SSD domain-containing protein {ECO:0000313|WBParaSite:NBR_0001970101-mRNA-1};
GN ORFNames=NBR_LOCUS19702 {ECO:0000313|EMBL:VDL83438.1};
OS Nippostrongylus brasiliensis (Rat hookworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae; Nippostrongylus.
OX NCBI_TaxID=27835 {ECO:0000313|Proteomes:UP000038043, ECO:0000313|WBParaSite:NBR_0001970101-mRNA-1};
RN [1] {ECO:0000313|WBParaSite:NBR_0001970101-mRNA-1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (FEB-2017) to UniProtKB.
RN [2] {ECO:0000313|EMBL:VDL83438.1, ECO:0000313|Proteomes:UP000271162}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Pathogen Informatics;
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
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DR EMBL; UYSL01024405; VDL83438.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0N4YR29; -.
DR STRING; 27835.A0A0N4YR29; -.
DR WBParaSite; NBR_0001970101-mRNA-1; NBR_0001970101-mRNA-1; NBR_0001970101.
DR OMA; CEKNDAF; -.
DR Proteomes; UP000038043; Unplaced.
DR Proteomes; UP000271162; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 1.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR PANTHER; PTHR10796:SF104; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02460; Patched; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 1.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000271162};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 169..188
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 200..222
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 228..251
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 272..294
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 300..323
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 370..390
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 170..325
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
SQ SEQUENCE 573 AA; 64533 MW; 2820EF0D888ABE23 CRC64;
MFKDVLVEAK DGGSLLRSGY REQVWDLVEE ISTKIKVKDS SGRELTYMEM CEPYCGKNDA
FITLLKLYNQ NYSRIDITYP TMDILGKQVF IAGNIYGVHL ANGSNSVEGF DTVILRYYMV
YPETKPLYDW EAKMVHLLYD SGKYDLLKSG AASDSLVAQE VKEMGEKSAP LLSIALAVLM
AFLMICSFRS KRRESKPLEA LLGGATPLLA GVTTVGVVSA TGLAFQSIVV STLFLLLAIG
IDDVFIMLAA WHRTERELDI PQRVAQMVKV SGCSMTVTSI TNIISFGNGV FSSTPVLQTF
AIYSVVASMI CYLYQLILFP AILTLTAHKE YEKSDEDKSC LPEELKCIKK AGEFHDRAWK
TLARLVGKPW LRVLMIAVLL VYWTFTYYGI STVETDLSVQ KLAPKEARIV IFKERYDEVI
KGMQTVAIVV TTPGDLRDPK VFADVNNTIR DYETASYSYG PESTFCFLKP YMEFLEFHEG
GEEDEEIPFT YKHIPAFIKS DGYWKATMRI NETACALDEP ECLTSFLFTT GFTTLASYNE
MFPLIEEWRA IARKHPALGV YAYSERSTYA DQV
//
