ID A0A0N8TUG6_9GAMM Unreviewed; 1047 AA.
AC A0A0N8TUG6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=RNA polymerase-associated protein RapA {ECO:0000313|EMBL:KPZ58337.1};
GN Name=rapA_1 {ECO:0000313|EMBL:KPZ58337.1};
GN ORFNames=AN393_00145 {ECO:0000313|EMBL:KPZ58337.1};
OS Pseudoalteromonas sp. P1-25.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Pseudoalteromonadaceae; Pseudoalteromonas.
OX NCBI_TaxID=1723758 {ECO:0000313|EMBL:KPZ58337.1, ECO:0000313|Proteomes:UP000050552};
RN [1] {ECO:0000313|EMBL:KPZ58337.1, ECO:0000313|Proteomes:UP000050552}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P1-25 {ECO:0000313|EMBL:KPZ58337.1,
RC ECO:0000313|Proteomes:UP000050552};
RG Swine Surveillance;
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPZ58337.1}.
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DR EMBL; LKDW01000001; KPZ58337.1; -; Genomic_DNA.
DR RefSeq; WP_055013581.1; NZ_LKDW01000001.1.
DR AlphaFoldDB; A0A0N8TUG6; -.
DR PATRIC; fig|1723758.3.peg.157; -.
DR OrthoDB; 9760715at2; -.
DR Proteomes; UP000050552; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd18012; DEXQc_arch_SWI2_SNF2; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR10799:SF1020; BTAF (TBP-ASSOCIATED FACTOR) HOMOLOG; 1.
DR PANTHER; PTHR10799; SNF2/RAD54 HELICASE FAMILY; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT DOMAIN 81..115
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT DOMAIN 601..760
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 888..1030
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1047 AA; 119221 MW; 4C02BBF10DB0F06F CRC64;
MSANLSKNDL LAIFEEIKNE QATLFPLSER FIKKLFRPNV LDKGKEYYKN GQISWLEFSS
DFAVIDSTVQ SATGSAFNQR IEISKVPTGY SVDTHCSCNA KTKCRHLAAV LFKLKIEHSG
EYGEDYFIND WFSELSALKS LNTKHPSQVL LFVLDIENNK VFLTPKIANY NKNNNYTLGR
NLTEQQLNSF VTPNDLLESD FRLFSWIRSQ NAVGNLELKG QWGFSALQQL IATERLFLQR
SRVAIKAQTG QSLNFKWQQK NELSQLITEL EHSKNWALIK TTPPAYLDLD HFKVGRIRTQ
LSADEIAHLQ SIPALHDANF DRIYKQLADN FGAGVIPHPN NEQVNVKQLG NAVLKATMDE
QALKVSLLFK YKNKNYPAGT APSSLINSAF ENTVTNELVN LGFEFCKGGL QSEFIFNKQS
PIHLHWLVYE VFPGFKKRGW QVTQTKVNVA DPQGHVTLDV NRAAGHQMHC KVQLSDAKAG
ALFNTDDATY QSLNRQSELF YYYPVGRQFG VISKDAINLL TEFKQRFEFV KTREEFNIPL
SYLPELVKHT AVTIDLHDDS LERYLDELNN TEQAMPVVPL HGLNDSVTLR EYQQQGVDWL
SFLKRHQLGG ILADDMGLGK TLQVIAFLAS SFNRPQAGPT LIVCPTSLVS NWQNEITKFA
KSLKVTTIFG SQRNEPLQHL AQAQCILTTY PLLKRDIAYY SPLYFENIIL DEAQYIKNDT
AQVSRLVKRL NADFKLCLSG TPIENNLFEL KSLLDFAMPS LLGSQAHFKQ HFQTPIEREA
DSERAEQLKS LIMPFILRRT KAQVAQELPQ KTELLKEFEF EPKQKDMYQG ITRALEEKLI
DLFAEQGAQK SKLAFLEALL KLRQICCHPK LIEPETQAGS AKLEWLTTHL PLMLRLGRKV
IIFSQFTSAL DLIAERLNDI HINFSMLTGQ TRHRDKVIDE FTSGKTSVFL ISLKAGGTGL
NLTQADTVIH FDPWWNPAVE KQATDRAYRI GQTNPVFVYK LIMSNSIEQK VFKMQQDKQA
LVDALFTDKS MSFTSFDEQQ MLSLIKS
//
