ID A0A0P0GG47_9BACT Unreviewed; 461 AA.
AC A0A0P0GG47;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Transcriptional regulatory protein ZraR {ECO:0000313|EMBL:ALJ56975.1};
GN Name=zraR {ECO:0000313|EMBL:ALJ56975.1};
GN ORFNames=AMD24_00818 {ECO:0000313|EMBL:ALJ56975.1};
OS Candidatus Xiphinematobacter sp. Idaho Grape.
OC Bacteria; Verrucomicrobiota; Spartobacteria; Xiphinematobacter.
OX NCBI_TaxID=1704307 {ECO:0000313|EMBL:ALJ56975.1, ECO:0000313|Proteomes:UP000062177};
RN [1] {ECO:0000313|EMBL:ALJ56975.1, ECO:0000313|Proteomes:UP000062177}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Idaho Grape {ECO:0000313|EMBL:ALJ56975.1,
RC ECO:0000313|Proteomes:UP000062177};
RX PubMed=26362082; DOI=10.1093/gbe/evv176;
RA Brown A.M., Howe D.K., Wasala S.K., Peetz A.B., Zasada I.A., Denver D.R.;
RT "Comparative Genomics of a Plant-Parasitic Nematode Endosymbiont Suggest a
RT Role in Nutritional Symbiosis.";
RL Genome Biol. Evol. 7:2727-2746(2015).
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DR EMBL; CP012665; ALJ56975.1; -; Genomic_DNA.
DR RefSeq; WP_062100776.1; NZ_CP012665.1.
DR AlphaFoldDB; A0A0P0GG47; -.
DR STRING; 1704307.AMD24_00818; -.
DR KEGG; xii:AMD24_00818; -.
DR PATRIC; fig|1704307.3.peg.908; -.
DR OrthoDB; 9802354at2; -.
DR Proteomes; UP000062177; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF123; NITROGEN ASSIMILATION REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00072; Response_reg; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00448; REC; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Phosphoprotein {ECO:0000256|PROSITE-ProRule:PRU00169};
KW Reference proteome {ECO:0000313|Proteomes:UP000062177};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 7..120
FT /note="Response regulatory"
FT /evidence="ECO:0000259|PROSITE:PS50110"
FT DOMAIN 145..374
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT MOD_RES 55
FT /note="4-aspartylphosphate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00169"
SQ SEQUENCE 461 AA; 51370 MW; 1D81D68FAF412C03 CRC64;
MAPLKPTLLV VDDEKNTREG LQASLEDAFE VFIASNMDGA LAILCEDSID VLITDLKLGA
DNGIRLIDAA LKLHRPPLCI MVTAYGTVDV AVEAIKRGAY DFVTKPVNLE RLELLIRRGL
REKGTKKGDQ DLKQQMERKF VSEGIIGTSS VITEAVQTIR QVASSRATVL ILGESGTGKE
LAARAIHYLS PRSAASFVAV HCAALSPQLL ESELFGHEKG AFTGAVERRI GRFEQASGGT
LFLDEIGEID LNTQVKILRV LGEHTFERVG SNRTLKTNVR LIAATNRNLT KLVSDGKFRD
DLFFRLNVVQ ITMPPLRRRR EDIPILAQAF LKESCRENGK PLKEIDTDAM AHLLEYHWPG
NVRELRTVIE HGVVMSNNPR ILSRDLPVAI HSRLVSTPTT HLPSPYLPLP PEPLTLRETQ
HNLILQTLEI CKGNRSETAR KLGISRRTLY RRLRQLGVQR D
//
