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Database: UniProt
Entry: A0A0P0URK9_9GAMM
LinkDB: A0A0P0URK9_9GAMM
Original site: A0A0P0URK9_9GAMM 
ID   A0A0P0URK9_9GAMM        Unreviewed;       378 AA.
AC   A0A0P0URK9;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   RecName: Full=ribonucleoside-diphosphate reductase {ECO:0000256|ARBA:ARBA00012274};
DE            EC=1.17.4.1 {ECO:0000256|ARBA:ARBA00012274};
GN   Name=nrdB {ECO:0000313|EMBL:BAS67864.1};
GN   ORFNames=BSEPE_0873 {ECO:0000313|EMBL:BAS67864.1};
OS   endosymbiont of Bathymodiolus septemdierum str. Myojin knoll.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; sulfur-oxidizing symbionts.
OX   NCBI_TaxID=1303921 {ECO:0000313|EMBL:BAS67864.1, ECO:0000313|Proteomes:UP000067399};
RN   [1] {ECO:0000313|EMBL:BAS67864.1, ECO:0000313|Proteomes:UP000067399}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Myojin Knoll {ECO:0000313|EMBL:BAS67864.1,
RC   ECO:0000313|Proteomes:UP000067399};
RA   Fujiwara Y., Takai K., Uematsu K., Tsuchida S., Hunt J.C., Hashimoto J.;
RT   "Phylogenetic characterization of endosymbionts in three hydrothermal vent
RT   mussels: influence on host distributions.";
RL   Mar. Ecol. Prog. Ser. 208:147-155(2000).
RN   [2] {ECO:0000313|EMBL:BAS67864.1, ECO:0000313|Proteomes:UP000067399}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Myojin Knoll {ECO:0000313|EMBL:BAS67864.1,
RC   ECO:0000313|Proteomes:UP000067399};
RX   PubMed=26418631; DOI=10.1038/ismej.2015.176;
RA   Ikuta T., Takaki Y., Nagai Y., Shimamura S., Tsuda M., Kawagucci S.,
RA   Aoki Y., Inoue K., Teruya M., Satou K., Teruya K., Shimoji M., Tamotsu H.,
RA   Hirano T., Maruyama T., Yoshida T.;
RT   "Heterogeneous composition of key metabolic gene clusters in a vent mussel
RT   symbiont population.";
RL   ISME J. 10:990-1001(2016).
CC   -!- COFACTOR:
CC       Name=Fe cation; Xref=ChEBI:CHEBI:24875;
CC         Evidence={ECO:0000256|ARBA:ARBA00001962};
CC   -!- PATHWAY: Genetic information processing; DNA replication.
CC       {ECO:0000256|ARBA:ARBA00005160}.
CC   -!- SIMILARITY: Belongs to the ribonucleoside diphosphate reductase small
CC       chain family. {ECO:0000256|ARBA:ARBA00009303}.
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DR   EMBL; AP013042; BAS67864.1; -; Genomic_DNA.
DR   RefSeq; WP_066044523.1; NZ_AP013042.1.
DR   AlphaFoldDB; A0A0P0URK9; -.
DR   STRING; 1303921.BSEPE_0873; -.
DR   KEGG; ebh:BSEPE_0873; -.
DR   OrthoDB; 9765051at2; -.
DR   UniPathway; UPA00326; -.
DR   Proteomes; UP000067399; Chromosome.
DR   GO; GO:0004748; F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor; IEA:UniProtKB-EC.
DR   GO; GO:0009263; P:deoxyribonucleotide biosynthetic process; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniPathway.
DR   CDD; cd01049; RNRR2; 1.
DR   Gene3D; 1.10.620.20; Ribonucleotide Reductase, subunit A; 1.
DR   InterPro; IPR009078; Ferritin-like_SF.
DR   InterPro; IPR012348; RNR-like.
DR   InterPro; IPR033909; RNR_small.
DR   InterPro; IPR030475; RNR_small_AS.
DR   InterPro; IPR000358; RNR_small_fam.
DR   PANTHER; PTHR23409; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN; 1.
DR   PANTHER; PTHR23409:SF18; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2; 1.
DR   Pfam; PF00268; Ribonuc_red_sm; 1.
DR   SUPFAM; SSF47240; Ferritin-like; 1.
DR   PROSITE; PS00368; RIBORED_SMALL; 1.
PE   3: Inferred from homology;
KW   Oxidoreductase {ECO:0000313|EMBL:BAS67864.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000067399}.
SQ   SEQUENCE   378 AA;  43587 MW;  50427B62EC28C44B CRC64;
     MAYSIFTKRI SDTLTEPMFF GNSVNVARFD KQKYKVFEKL TEKQLSFFWR PEEIDVSKDK
     IDFAKLLPNE KHIFISNLQY QILLDSVQGR SPSIAFLPIV SLPEVENWIE TWSFSETIHS
     RSYTHIIRAI VNEPGAVFDD IMKTDEIIKR AESVSEKYDI LIKCTQAYLL HGESTLKMGG
     TTVNIDLYCL KKKLYLTLMS VNILEAVRFY VSFACSFAFA ERKVMEGNAK IIKMIARDEA
     LHLSGTQYML NIMRSGKDDP DMQKIAIESE EEVIEMFKEA CQQEKEWAEY LFRDGSMIGL
     NANILKQYLE YITNIRMKAL GLTPIFDDIA NPLPWINHWL DSDNVQVAPQ ETEITSYLVS
     AIDNNIDAND TDFGDFKL
//
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