ID A0A0P0URK9_9GAMM Unreviewed; 378 AA.
AC A0A0P0URK9;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=ribonucleoside-diphosphate reductase {ECO:0000256|ARBA:ARBA00012274};
DE EC=1.17.4.1 {ECO:0000256|ARBA:ARBA00012274};
GN Name=nrdB {ECO:0000313|EMBL:BAS67864.1};
GN ORFNames=BSEPE_0873 {ECO:0000313|EMBL:BAS67864.1};
OS endosymbiont of Bathymodiolus septemdierum str. Myojin knoll.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; sulfur-oxidizing symbionts.
OX NCBI_TaxID=1303921 {ECO:0000313|EMBL:BAS67864.1, ECO:0000313|Proteomes:UP000067399};
RN [1] {ECO:0000313|EMBL:BAS67864.1, ECO:0000313|Proteomes:UP000067399}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Myojin Knoll {ECO:0000313|EMBL:BAS67864.1,
RC ECO:0000313|Proteomes:UP000067399};
RA Fujiwara Y., Takai K., Uematsu K., Tsuchida S., Hunt J.C., Hashimoto J.;
RT "Phylogenetic characterization of endosymbionts in three hydrothermal vent
RT mussels: influence on host distributions.";
RL Mar. Ecol. Prog. Ser. 208:147-155(2000).
RN [2] {ECO:0000313|EMBL:BAS67864.1, ECO:0000313|Proteomes:UP000067399}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Myojin Knoll {ECO:0000313|EMBL:BAS67864.1,
RC ECO:0000313|Proteomes:UP000067399};
RX PubMed=26418631; DOI=10.1038/ismej.2015.176;
RA Ikuta T., Takaki Y., Nagai Y., Shimamura S., Tsuda M., Kawagucci S.,
RA Aoki Y., Inoue K., Teruya M., Satou K., Teruya K., Shimoji M., Tamotsu H.,
RA Hirano T., Maruyama T., Yoshida T.;
RT "Heterogeneous composition of key metabolic gene clusters in a vent mussel
RT symbiont population.";
RL ISME J. 10:990-1001(2016).
CC -!- COFACTOR:
CC Name=Fe cation; Xref=ChEBI:CHEBI:24875;
CC Evidence={ECO:0000256|ARBA:ARBA00001962};
CC -!- PATHWAY: Genetic information processing; DNA replication.
CC {ECO:0000256|ARBA:ARBA00005160}.
CC -!- SIMILARITY: Belongs to the ribonucleoside diphosphate reductase small
CC chain family. {ECO:0000256|ARBA:ARBA00009303}.
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DR EMBL; AP013042; BAS67864.1; -; Genomic_DNA.
DR RefSeq; WP_066044523.1; NZ_AP013042.1.
DR AlphaFoldDB; A0A0P0URK9; -.
DR STRING; 1303921.BSEPE_0873; -.
DR KEGG; ebh:BSEPE_0873; -.
DR OrthoDB; 9765051at2; -.
DR UniPathway; UPA00326; -.
DR Proteomes; UP000067399; Chromosome.
DR GO; GO:0004748; F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor; IEA:UniProtKB-EC.
DR GO; GO:0009263; P:deoxyribonucleotide biosynthetic process; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniPathway.
DR CDD; cd01049; RNRR2; 1.
DR Gene3D; 1.10.620.20; Ribonucleotide Reductase, subunit A; 1.
DR InterPro; IPR009078; Ferritin-like_SF.
DR InterPro; IPR012348; RNR-like.
DR InterPro; IPR033909; RNR_small.
DR InterPro; IPR030475; RNR_small_AS.
DR InterPro; IPR000358; RNR_small_fam.
DR PANTHER; PTHR23409; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN; 1.
DR PANTHER; PTHR23409:SF18; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2; 1.
DR Pfam; PF00268; Ribonuc_red_sm; 1.
DR SUPFAM; SSF47240; Ferritin-like; 1.
DR PROSITE; PS00368; RIBORED_SMALL; 1.
PE 3: Inferred from homology;
KW Oxidoreductase {ECO:0000313|EMBL:BAS67864.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000067399}.
SQ SEQUENCE 378 AA; 43587 MW; 50427B62EC28C44B CRC64;
MAYSIFTKRI SDTLTEPMFF GNSVNVARFD KQKYKVFEKL TEKQLSFFWR PEEIDVSKDK
IDFAKLLPNE KHIFISNLQY QILLDSVQGR SPSIAFLPIV SLPEVENWIE TWSFSETIHS
RSYTHIIRAI VNEPGAVFDD IMKTDEIIKR AESVSEKYDI LIKCTQAYLL HGESTLKMGG
TTVNIDLYCL KKKLYLTLMS VNILEAVRFY VSFACSFAFA ERKVMEGNAK IIKMIARDEA
LHLSGTQYML NIMRSGKDDP DMQKIAIESE EEVIEMFKEA CQQEKEWAEY LFRDGSMIGL
NANILKQYLE YITNIRMKAL GLTPIFDDIA NPLPWINHWL DSDNVQVAPQ ETEITSYLVS
AIDNNIDAND TDFGDFKL
//