ID A0A0P0WQ51_ORYSJ Unreviewed; 1083 AA.
AC A0A0P0WQ51;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Os05g0529600 protein {ECO:0000313|EMBL:BAS95018.1};
GN OrderedLocusNames=Os05g0529600 {ECO:0000313|EMBL:BAS95018.1};
GN ORFNames=OSNPB_050529600 {ECO:0000313|EMBL:BAS95018.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:BAS95018.1, ECO:0000313|Proteomes:UP000059680};
RN [1] {ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RA Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2] {ECO:0000313|EMBL:BAS95018.1, ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- SIMILARITY: Belongs to the DnaX/STICHEL family.
CC {ECO:0000256|ARBA:ARBA00006360}.
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DR EMBL; AP014961; BAS95018.1; -; Genomic_DNA.
DR RefSeq; XP_015638230.1; XM_015782744.1.
DR AlphaFoldDB; A0A0P0WQ51; -.
DR SMR; A0A0P0WQ51; -.
DR STRING; 39947.A0A0P0WQ51; -.
DR PaxDb; 39947-A0A0P0WQ51; -.
DR EnsemblPlants; Os05t0529600-01; Os05t0529600-01; Os05g0529600.
DR GeneID; 4339405; -.
DR Gramene; Os05t0529600-01; Os05t0529600-01; Os05g0529600.
DR KEGG; osa:4339405; -.
DR eggNOG; KOG0989; Eukaryota.
DR InParanoid; A0A0P0WQ51; -.
DR OMA; RVENFQA; -.
DR OrthoDB; 3675885at2759; -.
DR Proteomes; UP000059680; Chromosome 5.
DR GO; GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
DR GO; GO:0005663; C:DNA replication factor C complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IBA:GO_Central.
DR GO; GO:0006261; P:DNA-templated DNA replication; IBA:GO_Central.
DR CDD; cd18137; HLD_clamp_pol_III_gamma_tau; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR022754; DNA_pol_III_gamma-3.
DR InterPro; IPR012763; DNA_pol_III_sug/sutau_N.
DR InterPro; IPR045085; HLD_clamp_pol_III_gamma_tau.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR02397; dnaX_nterm; 1.
DR PANTHER; PTHR11669:SF68; OS05G0529600 PROTEIN; 1.
DR PANTHER; PTHR11669; REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; 1.
DR Pfam; PF13177; DNA_pol3_delta2; 1.
DR Pfam; PF12169; DNA_pol3_gamma3; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000059680}.
FT DOMAIN 582..647
FT /note="DNA polymerase III gamma subunit"
FT /evidence="ECO:0000259|Pfam:PF12169"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 43..166
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..359
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 663..690
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 53..67
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1083 AA; 117226 MW; 47ACB7D838C18F1E CRC64;
MPAPAATAAA GMGSGGGGGG SGEHHMRGHA HLTNCIHLRH HHAHGLGAGS ASSGRRRSPT
GSSASASAAL MRDLLALQRS RSLRDPSTRR SVDSSSRVAA EPQGVGLGLG DDLHDDSSRP
GGALKTLLDQ LAENPQPKPS RGPRRRFKGG AGRRAAPASA TGGALDRGVD GAAAVSVNSS
SQEAVCGNKY LFGVVGGDDD DDDECGVELQ RPQASQDSRN VCGIPWNWSR IHHRGKSFLD
MAGRSFSCGL SDPKSASAAR RSIAATSAGS CGHMDGSRSH PHFPVTARLT STSSDSDSLP
LLVDGVRNGI GGIARSFSGE LGIFSNQTSE LDSDLASEAR SGQRSRGSHR GRHQSLTQKY
SPKTFKDMIG QSLVVQALSN AILKRKIGLV YVFYGPHGTG KTSCARVFAK ALNCHSPEHP
RPCDSCASCI AHNLGKSRSL VEIGPVGNID LDSIVDILDN VMLSPVPTQH RVFIVDDCNT
LPPDTWSVIS KVIERAPRRV VFILISPNLD LPHIIVSRCQ KFFFPKLKEC DIVNTLQWIS
TSEGLDVDRD ALKLIASRSD GSLRDAEMTL DQLSLLGQRI SMSLVQELVG LVSDDKLVDL
LDLALSADTV NTVKTLRDIT ETGVEPLALM SQLATIITDI LAGTYAFTQE RVRRKFFKCP
TLSKDDMEKL RQALKTLSEA EKQLRVSNDK MTWLTAALLQ LAPDKQYVLP SSSTSASFNQ
GLLTCPEGDI GRSTAIDHTN IYAGPHGLPR NANLGVDSDN NMAGTRRGKG PGEHTPDNHV
LLARATRVNL SRYRKSDNEM IWQAVLEHIR SDSVRKMLAK EARLISVSLG TAPTVQLMFS
SRVNKSKAER SREQVLHAFE SVLASAITLE IRYEPKDDAR AGHVPAISPY PEDSTSNVAL
RRSFTRHSSA SSRGENLIRR LQKDNVVHGA NSNQTRWVQS DPHILTEGEI IEVGPSQVDW
HSEPNNSAGV RKENIVLQGR EVVNNEHGRQ NSIVRGKVSL AHVINKAETC SQQGGWSRQK
AMSIAEKLEQ ENLRLEPKSS LLCWKASSTT RRKLSALKMR TRRSRALSRL AFCGKCISTK
SPR
//
