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Database: UniProt
Entry: A0A0P1GHM7_9RHOB
LinkDB: A0A0P1GHM7_9RHOB
Original site: A0A0P1GHM7_9RHOB 
ID   A0A0P1GHM7_9RHOB        Unreviewed;       401 AA.
AC   A0A0P1GHM7;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   RecName: Full=ornithine decarboxylase {ECO:0000256|ARBA:ARBA00034138};
DE            EC=4.1.1.17 {ECO:0000256|ARBA:ARBA00034138};
GN   Name=ldc {ECO:0000313|EMBL:CUH81247.1};
GN   ORFNames=TRM7557_03316 {ECO:0000313|EMBL:CUH81247.1};
OS   Tritonibacter multivorans.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Tritonibacter.
OX   NCBI_TaxID=928856 {ECO:0000313|EMBL:CUH81247.1, ECO:0000313|Proteomes:UP000052022};
RN   [1] {ECO:0000313|EMBL:CUH81247.1, ECO:0000313|Proteomes:UP000052022}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CECT 7557 {ECO:0000313|EMBL:CUH81247.1,
RC   ECO:0000313|Proteomes:UP000052022};
RG   Swine Surveillance;
RL   Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=H(+) + L-ornithine = CO2 + putrescine; Xref=Rhea:RHEA:22964,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:46911,
CC         ChEBI:CHEBI:326268; EC=4.1.1.17;
CC         Evidence={ECO:0000256|ARBA:ARBA00034037};
CC   -!- COFACTOR:
CC       Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC         Evidence={ECO:0000256|ARBA:ARBA00001933,
CC         ECO:0000256|PIRSR:PIRSR600183-50};
CC   -!- PATHWAY: Amine and polyamine biosynthesis; putrescine biosynthesis via
CC       L-ornithine pathway; putrescine from L-ornithine: step 1/1.
CC       {ECO:0000256|ARBA:ARBA00034115}.
CC   -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-II family.
CC       {ECO:0000256|ARBA:ARBA00008872, ECO:0000256|RuleBase:RU003737}.
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DR   EMBL; CYSD01000042; CUH81247.1; -; Genomic_DNA.
DR   RefSeq; WP_058291309.1; NZ_JAQIPA010000007.1.
DR   AlphaFoldDB; A0A0P1GHM7; -.
DR   STRING; 928856.SAMN04488049_102152; -.
DR   OrthoDB; 9802147at2; -.
DR   Proteomes; UP000052022; Unassembled WGS sequence.
DR   GO; GO:0004586; F:ornithine decarboxylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006596; P:polyamine biosynthetic process; IEA:InterPro.
DR   CDD; cd00622; PLPDE_III_ODC; 1.
DR   Gene3D; 3.20.20.10; Alanine racemase; 1.
DR   InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR   InterPro; IPR022643; De-COase2_C.
DR   InterPro; IPR022644; De-COase2_N.
DR   InterPro; IPR022653; De-COase2_pyr-phos_BS.
DR   InterPro; IPR000183; Orn/DAP/Arg_de-COase.
DR   InterPro; IPR002433; Orn_de-COase.
DR   InterPro; IPR029066; PLP-binding_barrel.
DR   PANTHER; PTHR11482; ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE; 1.
DR   PANTHER; PTHR11482:SF6; ORNITHINE DECARBOXYLASE 1-RELATED; 1.
DR   Pfam; PF02784; Orn_Arg_deC_N; 1.
DR   Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR   PRINTS; PR01179; ODADCRBXLASE.
DR   PRINTS; PR01182; ORNDCRBXLASE.
DR   SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR   SUPFAM; SSF51419; PLP-binding barrel; 1.
DR   PROSITE; PS00878; ODR_DC_2_1; 1.
PE   3: Inferred from homology;
KW   Lyase {ECO:0000313|EMBL:CUH81247.1};
KW   Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR600183-50};
KW   Reference proteome {ECO:0000313|Proteomes:UP000052022}.
FT   DOMAIN          43..268
FT                   /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02784"
FT   DOMAIN          269..361
FT                   /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF00278"
FT   ACT_SITE        333
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
FT   MOD_RES         60
FT                   /note="N6-(pyridoxal phosphate)lysine"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
SQ   SEQUENCE   401 AA;  42623 MW;  59DB209E5C7275DE CRC64;
     MNQLQSLTQI QSDALWPSPE THLAEMTPDI PVLYLSPARL RGQAGRFLRH FPGQVTYAVK
     ANPHPVVLRN LVAAGITAFD VASPAEMEAV RSASAAAVLH YNNPIRSEAE VAAGVAFGVY
     SWSIDDARSL AQLANVPRHC EVAVRFALPV AGAAYDFGTK FGASPEEAID LLRQVAALGF
     RPALCFHPGT QCEDPSAWIA YMQAAKEIAA CANVQLARLN LGGGFAARHY GTPPDLEPVL
     LALGQANRRL FGAAGPDLLC EPGRAMVSDA FTLAVRIKGM RDGGDVVFLN DGIYGGLMDL
     RDMGLPHRLR VVSPDGALRQ GAVKARQVFG PTCDSLDQLP DGVPLPVECT VGDYLLFEGL
     GAYSLAMSTR FNGYGLSELV TVQSLVPRIS DERSGQGGVS G
//
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