ID A0A0P1GJA6_9RHOB Unreviewed; 604 AA.
AC A0A0P1GJA6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Oligoendopeptidase F, plasmid {ECO:0000313|EMBL:CUH76210.1};
DE EC=3.4.24.- {ECO:0000313|EMBL:CUH76210.1};
GN Name=pepF1 {ECO:0000313|EMBL:CUH76210.1};
GN ORFNames=TRN7648_00835 {ECO:0000313|EMBL:CUH76210.1};
OS Tropicibacter naphthalenivorans.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Tropicibacter.
OX NCBI_TaxID=441103 {ECO:0000313|EMBL:CUH76210.1, ECO:0000313|Proteomes:UP000054935};
RN [1] {ECO:0000313|EMBL:CUH76210.1, ECO:0000313|Proteomes:UP000054935}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CECT 7648 {ECO:0000313|EMBL:CUH76210.1,
RC ECO:0000313|Proteomes:UP000054935};
RG Swine Surveillance;
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|RuleBase:RU003435};
CC Note=Binds 1 zinc ion. {ECO:0000256|RuleBase:RU003435};
CC -!- SIMILARITY: Belongs to the peptidase M3 family.
CC {ECO:0000256|RuleBase:RU003435}.
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DR EMBL; CYSE01000001; CUH76210.1; -; Genomic_DNA.
DR RefSeq; WP_058246342.1; NZ_FWXX01000001.1.
DR AlphaFoldDB; A0A0P1GJA6; -.
DR STRING; 441103.TRN7648_00835; -.
DR OrthoDB; 9766487at2; -.
DR Proteomes; UP000054935; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd09610; M3B_PepF; 1.
DR Gene3D; 1.10.1370.20; Oligoendopeptidase f, C-terminal domain; 1.
DR Gene3D; 1.20.140.70; Oligopeptidase f, N-terminal domain; 1.
DR InterPro; IPR013647; OligopepF_N_dom.
DR InterPro; IPR042088; OligoPept_F_C.
DR InterPro; IPR045090; Pept_M3A_M3B.
DR InterPro; IPR001567; Pept_M3A_M3B_dom.
DR InterPro; IPR011977; Pept_M3B_clade3.
DR NCBIfam; TIGR02290; M3_fam_3; 1.
DR PANTHER; PTHR11804:SF5; OLIGOENDOPEPTIDASE F; 1.
DR PANTHER; PTHR11804; PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED; 1.
DR Pfam; PF01432; Peptidase_M3; 1.
DR Pfam; PF08439; Peptidase_M3_N; 1.
DR SUPFAM; SSF55486; Metalloproteases ('zincins'), catalytic domain; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU003435};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU003435};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049,
KW ECO:0000256|RuleBase:RU003435};
KW Protease {ECO:0000256|ARBA:ARBA00022670, ECO:0000256|RuleBase:RU003435};
KW Reference proteome {ECO:0000313|Proteomes:UP000054935};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU003435}.
FT DOMAIN 126..194
FT /note="Oligopeptidase F N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08439"
FT DOMAIN 349..589
FT /note="Peptidase M3A/M3B catalytic"
FT /evidence="ECO:0000259|Pfam:PF01432"
SQ SEQUENCE 604 AA; 68347 MW; 780CF97F4D47A26F CRC64;
MTIQPTFDAN ANAGGKDLGG LPEWDLTDLY PSDDAPELKR DLDWLEEACR SFAADYEGKL
ATLSADELLT CVQRNERIDN IAGRIMSFAG LRYYQLTIDA ERAKFLSDCQ EKITNFSTPL
VFFTLELNRL EDDHLDKLFA QNGDLARYKP VFDRIRAMKP YQLSDELEKF LHDLGVVGDA
WERLFDETIA GLTFTIDGEE LNIEATLNFL TEQDRSKREA AARELARVFA DNIKTFARVH
NTQAKEKEIL DRWRGMPSPQ MGRHLSNHVE PEVVEALRNA VVDAYPRLSH RYYALKAKWL
GLETMEVWDR NAPLPMETDR IVGWDEARQT VMDAYNAFDP RMGEIATPFF DKGWIDAGVK
PGKAPGAFAH PTVTDVHPYV MLNYLGKPRD VMTLAHELGH GVHQVLAAGQ GEMLSSTPLT
LAETASVFGE MLTFQTMLDK AKDDAERKVL LAGKVEDMIN TVVRQIAFYD FECKLHDARR
GGELTPDDIN ALWMSVQAES LGPVFDFMEG YETFWAYIPH FVHSPFYVYA YAFGDGLVNA
LYAAYQEQPE GFQDKYFDML KAGGSKHHSE LLAPFGLDAS DPKFWDKGLS MIEGFIDQLE
AMEA
//
