ID A0A0P4R8N6_9ACTN Unreviewed; 391 AA.
AC A0A0P4R8N6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN ORFNames=TPA0598_05_04650 {ECO:0000313|EMBL:GAO09743.1};
OS Streptomyces lydicamycinicus.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=1546107 {ECO:0000313|EMBL:GAO09743.1, ECO:0000313|Proteomes:UP000048965};
RN [1] {ECO:0000313|Proteomes:UP000048965}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 110027 {ECO:0000313|Proteomes:UP000048965};
RA Komaki H., Ichikawa N., Katano-Makiyama Y., Hosoyama A., Hashimoto M.,
RA Uohara A., Kitahashi Y., Ohji S., Kimura A., Yamazoe A., Igarashi Y.,
RA Fujita N.;
RT "Whole genome shotgun sequence of Streptomyces sp. NBRC 110027.";
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:GAO09743.1, ECO:0000313|Proteomes:UP000048965}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 110027 {ECO:0000313|EMBL:GAO09743.1,
RC ECO:0000313|Proteomes:UP000048965};
RX PubMed=26380643; DOI=10.1186/s40793-015-0046-5;
RA Komaki H., Ichikawa N., Hosoyama A., Fujita N., Igarashi Y.;
RT "Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a
RT producer of anti-MRSA antibiotic lydicamycins.";
RL Stand. Genomic Sci. 10:58-58(2015).
CC -!- SIMILARITY: Belongs to the transglycosylase family. Rpf subfamily.
CC {ECO:0000256|ARBA:ARBA00010830}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAO09743.1}.
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DR EMBL; BBNO01000005; GAO09743.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0P4R8N6; -.
DR Proteomes; UP000048965; Unassembled WGS sequence.
DR GO; GO:0016787; F:hydrolase activity; IEA:InterPro.
DR CDD; cd00118; LysM; 1.
DR CDD; cd13925; RPF; 1.
DR Gene3D; 1.10.530.10; -; 1.
DR Gene3D; 3.10.350.10; LysM domain; 1.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR023346; Lysozyme-like_dom_sf.
DR InterPro; IPR010618; RPF.
DR Pfam; PF01476; LysM; 1.
DR Pfam; PF06737; Transglycosylas; 1.
DR SMART; SM00257; LysM; 1.
DR SUPFAM; SSF53955; Lysozyme-like; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000048965}.
FT DOMAIN 337..386
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT REGION 142..343
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..193
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..226
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..248
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 250..265
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 266..292
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 296..333
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 391 AA; 40185 MW; 8EB6F148D0645EE7 CRC64;
MGDRCNGAAR VRRPAGGSVE QLEELVEQLN RRAKGIRMRS GNGRHRRPRQ APAIFVTAGV
TGAGFALPLL GASGAHAADT ATWDKVAQCE SAGVWSAASG NGYYGGLQLT QEMWDNYGGS
AYASRPDYAS RSQQIAVAES ILDDRGPDAW PSCAVNAGLT GDGKAPDVDP GSTSTPAPDP
SDSQGSLDPW DTSGSSRSHD DGDSAGQDDA PRDEHGDADR RPSDATPSPD PSDSGEPGDA
STSPEPSDPA TPGDRDDDPS RSADPSEDDP SGSPSTDPSE DGSRTDSTGT PHKVPTKGKH
RGEAGDEGAK GSDDGRSGGR HASRGDDAHR TGPAADGDYT VRPGDSLSAI AVAHRLPGGW
SALYDRNEGV IGSDADLIQP GQQLDLGRNA G
//
