ID A0A0P5WGX3_9CRUS Unreviewed; 309 AA.
AC A0A0P5WGX3;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 08-NOV-2023, entry version 19.
DE RecName: Full=rRNA methyltransferase 1, mitochondrial {ECO:0000256|ARBA:ARBA00034881};
GN ORFNames=APZ42_030821 {ECO:0000313|EMBL:KZS05852.1};
OS Daphnia magna.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=35525 {ECO:0000313|EMBL:JAM17200.1};
RN [1] {ECO:0000313|EMBL:JAM17200.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D., Podicheti R., Orsini L., Colbourne J., Pfrender M.;
RT "Daphnia magna gene sets from two clonal populations assembled and
RT annotated with EvidentialGene.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAN54425.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D.G.;
RT "EvidentialGene: Evidence-directed Construction of Complete mRNA
RT Transcriptomes without Genomes.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:JAM17200.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:KZS05852.1, ECO:0000313|Proteomes:UP000076858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Xinb3 {ECO:0000313|EMBL:KZS05852.1,
RC ECO:0000313|Proteomes:UP000076858};
RC TISSUE=Complete organism {ECO:0000313|EMBL:KZS05852.1};
RA Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the class IV-like SAM-binding methyltransferase
CC superfamily. RNA methyltransferase TrmH family.
CC {ECO:0000256|ARBA:ARBA00007228}.
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DR EMBL; GDIP01086515; JAM17200.1; -; Transcribed_RNA.
DR EMBL; GDIQ01040312; JAN54425.1; -; Transcribed_RNA.
DR EMBL; LRGB01002860; KZS05852.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0P5WGX3; -.
DR STRING; 35525.A0A0P5WGX3; -.
DR EnsemblMetazoa; XM_032932451.2; XP_032788342.1; LOC116925718.
DR EnsemblMetazoa; XM_032932452.2; XP_032788343.1; LOC116925718.
DR EnsemblMetazoa; XM_032932453.2; XP_032788344.1; LOC116925718.
DR EnsemblMetazoa; XM_032932454.2; XP_032788345.1; LOC116925718.
DR EnsemblMetazoa; XM_032932456.2; XP_032788347.1; LOC116925718.
DR EnsemblMetazoa; XM_032932457.2; XP_032788348.1; LOC116925718.
DR EnsemblMetazoa; XM_032932458.2; XP_032788349.1; LOC116925718.
DR EnsemblMetazoa; XM_032932459.2; XP_032788350.1; LOC116925718.
DR EnsemblMetazoa; XM_032932460.2; XP_032788351.1; LOC116925718.
DR EnsemblMetazoa; XM_032932461.2; XP_032788352.1; LOC116925718.
DR OrthoDB; 5404245at2759; -.
DR Proteomes; UP000076858; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0031167; P:rRNA methylation; IEA:InterPro.
DR CDD; cd18105; SpoU-like_MRM1; 1.
DR Gene3D; 3.30.1330.30; -; 1.
DR Gene3D; 3.40.1280.10; -; 1.
DR InterPro; IPR029028; Alpha/beta_knot_MTases.
DR InterPro; IPR047182; MRM1.
DR InterPro; IPR047261; MRM1_MeTrfase_dom.
DR InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR InterPro; IPR001537; SpoU_MeTrfase.
DR InterPro; IPR013123; SpoU_subst-bd.
DR InterPro; IPR029026; tRNA_m1G_MTases_N.
DR PANTHER; PTHR46103; RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR46103:SF1; RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL; 1.
DR Pfam; PF00588; SpoU_methylase; 1.
DR Pfam; PF08032; SpoU_sub_bind; 1.
DR SMART; SM00967; SpoU_sub_bind; 1.
DR SUPFAM; SSF75217; alpha/beta knot; 1.
DR SUPFAM; SSF55315; L30e-like; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603,
KW ECO:0000313|EMBL:JAM17200.1};
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Reference proteome {ECO:0000313|Proteomes:UP000076858};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:JAM17200.1};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 45..124
FT /note="RNA 2-O ribose methyltransferase substrate binding"
FT /evidence="ECO:0000259|SMART:SM00967"
SQ SEQUENCE 309 AA; 34515 MW; 9A2D61F56773E4BE CRC64;
MWSYKVSHFV MRRSFSTSSI SKASLDLMTL DEKKSPGRQE LCFDILYGIH PISCAIEAKR
RSIETVFYRR DLLNHSVRAK EIIERCWTAN VKTQVLPQSK INNIAPKGKP NQGLLAKATR
LYYVPTPCTH QLIEDSLSDK KSSQSPVWLL LNEIQDPMNF GSILRSAYFM GCDRIFVSSH
KSCSLTPVVS KASSGVMELM PVYSVNNPSQ FCQILKESKW DVVGTGSHID ELNEKSSVCS
PVCSFFRKNP TLIVLGNEGQ GLPKELVALC THQLYIEARP NLNKNIDSMN VSAAAAVILH
TILNGSDRS
//
