ID A0A0P5YDM5_9CRUS Unreviewed; 739 AA.
AC A0A0P5YDM5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Polycomb protein Scm {ECO:0000313|EMBL:JAM43631.1, ECO:0000313|EMBL:KZS20784.1};
GN ORFNames=APZ42_012428 {ECO:0000313|EMBL:KZS20784.1};
OS Daphnia magna.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=35525 {ECO:0000313|EMBL:JAM43631.1};
RN [1] {ECO:0000313|EMBL:JAM43631.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D., Podicheti R., Orsini L., Colbourne J., Pfrender M.;
RT "Daphnia magna gene sets from two clonal populations assembled and
RT annotated with EvidentialGene.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAM43631.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KZS20784.1, ECO:0000313|Proteomes:UP000076858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Xinb3 {ECO:0000313|EMBL:KZS20784.1,
RC ECO:0000313|Proteomes:UP000076858};
RC TISSUE=Complete organism {ECO:0000313|EMBL:KZS20784.1};
RA Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SCM family. {ECO:0000256|ARBA:ARBA00008469}.
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DR EMBL; GDIP01060084; JAM43631.1; -; Transcribed_RNA.
DR EMBL; LRGB01000115; KZS20784.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0P5YDM5; -.
DR STRING; 35525.A0A0P5YDM5; -.
DR Proteomes; UP000076858; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd20110; MBT_dScm_rpt2; 1.
DR CDD; cd09578; SAM_Scm; 1.
DR Gene3D; 2.30.30.140; -; 2.
DR Gene3D; 3.90.1150.190; SLED domain; 1.
DR Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 1.
DR InterPro; IPR004092; Mbt.
DR InterPro; IPR001660; SAM.
DR InterPro; IPR013761; SAM/pointed_sf.
DR InterPro; IPR047531; SAM_Scm-like.
DR InterPro; IPR021987; SLED.
DR InterPro; IPR038348; SLED_sf.
DR InterPro; IPR011017; TRASH_dom.
DR PANTHER; PTHR12247; POLYCOMB GROUP PROTEIN; 1.
DR PANTHER; PTHR12247:SF132; POLYCOMB PROTEIN SCM; 1.
DR Pfam; PF02820; MBT; 2.
DR Pfam; PF00536; SAM_1; 1.
DR Pfam; PF12140; SLED; 1.
DR SMART; SM00561; MBT; 2.
DR SMART; SM00454; SAM; 1.
DR SMART; SM00746; TRASH; 2.
DR SUPFAM; SSF47769; SAM/Pointed domain; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR PROSITE; PS51079; MBT; 2.
DR PROSITE; PS50105; SAM_DOMAIN; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000076858};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Repressor {ECO:0000256|ARBA:ARBA00022491}.
FT REPEAT 142..240
FT /note="MBT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT REPEAT 248..349
FT /note="MBT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT DOMAIN 669..734
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT REGION 628..661
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 629..661
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 739 AA; 81149 MW; 3D43982AA3847BFB CRC64;
MSHQSFFQHS KINGNPTVTA EGGMFPCGWC SQAEKPNLYV LPLKNGRHTF CSAACLSEFR
KGACFQCGEA IAGVPFQSLV NLAMRDFCSE KCCLKFKKRE HSKLKLNCSS ATNLQNNPDL
PHLPTAANPE SSAVLSSNLC PFAWEDYLAE TRSVAAPPVC FKQHAVPPTN EFHCGVKLEA
QDPRNLTSTC IATVVAIIGP RLRLRLDGSD NKNDFWRLVD SNDIHPIGHC ESNGGMLQPP
LGFRMNASSW RTFLLKTLSG AETAPSRYFK KEPSSPRYNM FRIGQKLEAV DRKNPHLICA
ATVGAVNNDS IFVTFDGWKG AFDYWCRYDS RDIFPVGFCA MVGHPLQPPG QKFALASGSR
FKSRVLSVPP PPPLQFISTG VEKMPSEVGK LSISSLDLGA KTETCTIVPE PDTSSIERVK
TAVSVYINRL CNCGPHLDSS KVQKLPRLIG PGTLSQVLRE TVQGLVDAAL QTKQTFSILR
TRQGDGDIVI RAKYENVVHT LRLPPVDDVL GLETYLEFLS EDLGYCENLI STVAVANCKK
CVANSAVSDR VDKPDGLRAL KRKGRDYVKP AVSVKRKKSM ISLISDHNDL NKREPISPSC
GSPVGNCLTN KAANANATVA PLKIELNPEL QSPDQQRATS TTSHDNETDA RGTNLNTKVF
STPTDPAEWS VDDVMRYLTS VDAGLSVHAQ LFQKHEIDGK ALLLLTSDMM MKYMGLKLGP
SLKICNSINR LKGRRHLPI
//
