ID A0A0P7YJN6_9RHOB Unreviewed; 529 AA.
AC A0A0P7YJN6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=DNA ligase (ATP) {ECO:0000256|ARBA:ARBA00012727};
DE EC=6.5.1.1 {ECO:0000256|ARBA:ARBA00012727};
GN ORFNames=HLUCCA24_01215 {ECO:0000313|EMBL:KPQ21481.1};
OS Rhodobacteraceae bacterium HLUCCA24.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae.
OX NCBI_TaxID=1666918 {ECO:0000313|EMBL:KPQ21481.1, ECO:0000313|Proteomes:UP000054465};
RN [1] {ECO:0000313|EMBL:KPQ21481.1, ECO:0000313|Proteomes:UP000054465}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HLUCCA24 {ECO:0000313|EMBL:KPQ21481.1};
RA Nelson W.C., Romine M.F., Lindemann S.R.;
RT "Identification and resolution of microdiversity through metagenomic
RT sequencing of parallel consortia.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-
CC (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP +
CC diphosphate.; EC=6.5.1.1; Evidence={ECO:0000256|ARBA:ARBA00034003};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPQ21481.1}.
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DR EMBL; LKOZ01000053; KPQ21481.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0P7YJN6; -.
DR PATRIC; fig|1666918.4.peg.317; -.
DR Proteomes; UP000054465; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR CDD; cd07897; Adenylation_DNA_ligase_Bac1; 1.
DR CDD; cd07972; OBF_DNA_ligase_Arch_LigB; 1.
DR Gene3D; 1.10.3260.10; DNA ligase, ATP-dependent, N-terminal domain; 1.
DR Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR026333; ATP_dep_DNA_lig_pp_1105_fam.
DR InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR InterPro; IPR036599; DNA_ligase_N_sf.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR NCBIfam; TIGR04120; DNA_lig_bact; 1.
DR PANTHER; PTHR45674; DNA LIGASE 1/3 FAMILY MEMBER; 1.
DR PANTHER; PTHR45674:SF13; DNA LIGASE-RELATED; 1.
DR Pfam; PF04679; DNA_ligase_A_C; 1.
DR Pfam; PF01068; DNA_ligase_A_M; 1.
DR Pfam; PF04675; DNA_ligase_A_N; 1.
DR SUPFAM; SSF117018; ATP-dependent DNA ligase DNA-binding domain; 1.
DR SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:KPQ21481.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 302..433
FT /note="ATP-dependent DNA ligase family profile"
FT /evidence="ECO:0000259|PROSITE:PS50160"
SQ SEQUENCE 529 AA; 59586 MW; A381DC7C656C3E26 CRC64;
MKDFAALVAR IDQTTRTSAK TAALAEYFAQ ASDADRLWTV ALFSGRRPRR AITTTQMREW
AAERAGLPLW LVEESYPVVG DLAETIALIL PPPSRGSNRS LADWINLLRS LSDMPLDRRR
DEVLAAWDAL DAAERFIFNK LLTGGWRIGV SQKLMTRALA RATGRDEAEM AHRLMGAWDP
ATTTWHALIE AEDAAADLSR PYPFCLAHQL DAGPEGLGDP SDWRAEWKWD GIRGQLILRE
GQHFVWSRGE ELMTDRFPEL ARTRDFLPPG TVIDGEILAW QDGPRPFNDL QKRIGRKTVP
AKLLSEAPVA LAAYDLLEDE GRDIRARPFS ERRARLERLT ADLPGEAPVV LPPLIAFDDW
AALAATRATA RDHAAEGVML KHADSPYHAG RKRGDWWKWK LDPLVIDAVM IYAQAGHGRR
ANLFTDFTFA VWDGAALVPF TKAYSGLTDA EFRRITAWVR KNTLQRFGPV RQVKPRQVFE
IAFEGIHESP RHKSGIALRF PRMSRWREDK PPEEAGTLEE LKAMLATHG
//
