ID A0A0P8Z0M7_9CLOT Unreviewed; 570 AA.
AC A0A0P8Z0M7;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Alginate biosynthesis transcriptional regulatory protein AlgB {ECO:0000313|EMBL:KPU45706.1};
GN Name=algB {ECO:0000313|EMBL:KPU45706.1};
GN ORFNames=OXPF_09390 {ECO:0000313|EMBL:KPU45706.1};
OS Oxobacter pfennigii.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Oxobacter.
OX NCBI_TaxID=36849 {ECO:0000313|EMBL:KPU45706.1, ECO:0000313|Proteomes:UP000050326};
RN [1] {ECO:0000313|EMBL:KPU45706.1, ECO:0000313|Proteomes:UP000050326}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 3222 {ECO:0000313|EMBL:KPU45706.1,
RC ECO:0000313|Proteomes:UP000050326};
RA Poehlein A., Bengelsdorf F.R., Schiel-Bengelsdorf B., Duerre P., Daniel R.;
RT "Genome sequence of Oxobacter pfennigii DSM 3222.";
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPU45706.1}.
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DR EMBL; LKET01000021; KPU45706.1; -; Genomic_DNA.
DR RefSeq; WP_054874039.1; NZ_LKET01000021.1.
DR AlphaFoldDB; A0A0P8Z0M7; -.
DR STRING; 36849.OXPF_09390; -.
DR OrthoDB; 9803970at2; -.
DR Proteomes; UP000050326; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000050326};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 283..500
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 570 AA; 65255 MW; C9AF958CEAD59130 CRC64;
MLLAEIKNDA IKFAEVISKI LEVDVLIVDN NLKTISNTYH YPDKPMTIHR MSIIGQVITS
GNTITIDDKD DYATCRECSD FMKCDMKGFI CVPIRYKGAV VGAIALIVPE HKIPHVFSNV
NNSIEFLERM ADLLSSKIQN SDDYNNLNLI KREREVIMDS IDYAMVSMDE LGYITYYNKR
FKQYFGENID CFGMFIRDVI PHKYLTEFLS NYIEFSDRLI YFEKDSRPFY GFLSCMNIDI
NGSRGGMLFI FKSISDVNIQ LNEIGYSNTR MTFKFLEGGL IPEQVIEEAK RLSVTSKTVL
ISGETGAGEE LLAKAMHTFS DRVNNCFITV NCDGTYRELL EESLFGDDRS LHVVGGLGKL
QLAHKGTIYF YKIDQMPIYL QRRLVEVLKT GTIYRAGMHG IKVDVRMIFS TSSDLAGLVR
NGLFDDELYY RISENTIYIP PLRQDKESLC QLIDSSARFY KEKYDKKSLS FDIQAMDVLL
NYSWPGNRNE LEKVMDNIVY RCTGQVTSGD LAQFNLMDER ESAIKLSLIR DLEKESIAAL
LASNINKDEV AKTLGISRAT LYRKIKKYNL
//
