ID A0A0Q0GFL5_9GAMM Unreviewed; 1291 AA.
AC A0A0Q0GFL5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=ATP-dependent RNA helicase HrpB {ECO:0000313|EMBL:KPZ70541.1};
DE EC=3.6.4.13 {ECO:0000313|EMBL:KPZ70541.1};
GN Name=hrpB_1 {ECO:0000313|EMBL:KPZ70541.1};
GN ORFNames=AN944_02289 {ECO:0000313|EMBL:KPZ70541.1};
OS Shewanella sp. P1-14-1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=1723761 {ECO:0000313|EMBL:KPZ70541.1, ECO:0000313|Proteomes:UP000050414};
RN [1] {ECO:0000313|EMBL:KPZ70541.1, ECO:0000313|Proteomes:UP000050414}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P1-14-1 {ECO:0000313|EMBL:KPZ70541.1,
RC ECO:0000313|Proteomes:UP000050414};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPZ70541.1}.
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DR EMBL; LKTL01000013; KPZ70541.1; -; Genomic_DNA.
DR RefSeq; WP_055024721.1; NZ_LKTL01000013.1.
DR PATRIC; fig|1723761.3.peg.2340; -.
DR Proteomes; UP000050414; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17989; DEXHc_HrpA; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:KPZ70541.1};
KW Hydrolase {ECO:0000313|EMBL:KPZ70541.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000050414}.
FT DOMAIN 84..247
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 277..440
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1291 AA; 147480 MW; B21331A5C061BCAB CRC64;
MNSDQHPLSK AYLNSCYQTD AARIRRRLYQ LNKEPQSEKK VQVLAKLAEQ ATQAYEKAQL
RLKNSPKVTY PDALPVSQKR DDIASAIANN QVVIVAGETG SGKTTQLPKI CLELGLGTRG
LIGHTQPRRL AARSVANRVA EEINSPLGEV VGFKVRFADA ISPDSYVKLM TDGILLAELT
SDKFLNQYDA IIIDEAHERS LNIDFILGYL KQVLKKRPDL KVIITSATID VERFSKHFNN
APVIEVSGRT FPVETRYRPL VRDTDADLDV SDGIFSAVDE LMAEGPGDIL IFMNGEREIR
DTAEMLRKQK YRNTEVLPLY ARLSYGEQSK VFKSHIGRRI VLATNVAETS LTVPGIRYVI
DPGTARISRY SYRTKVQRLP IEPISQASAN QRQGRCGRVG PGICIRLYDE TDFIQRPEFT
DPEILRTNLA SVILQMLAIG LGDIAGFPFI QPPEQKHIRD GFLLLEELQA VKQKRKELVL
TNLGRNLAKI PLDPRLARMV LEAKDMSCLH EVMVIASGLS IQDPRERPIE KKQAADECHR
RYADKDSDFV SWVNLWNYLK DQKSELSASQ FRKQCREEYL AYLRVREWQD LYTQIKQAVH
DLKWRLNDTP ASYDNLHKAL LSGLLSHIGF KDANNEYLGA RNRKFFVFPG SPLAKKGPKW
IMAAELTETS RLFARCCAKI QPEWLEPLAA HLIKKNHLEP HFEAKPASVI AFENQVLYGL
TVVNRRRVQY GPIDPVEARE IFIRSALAEG QLHTKEPFFI KNQQLLNDIE SLEHKSRRRD
ILVDEQVLVD FYDPLIPQGI YNAPLFFKWW KQARKETPEL LDFNQDLLMQ RSADHISALD
FPEVWQKANL GLQVSYHFEP AAVDDGVSVH IPVALINQVD TEDFDWLVPG LREEKVVALI
KSLPKNLRRN FVPAPDYARA CVQAMEPFSM PLLDAMCKQL LRMTGTRISG DDFDLTQLSA
HLTINFKIED DKHRLVDQGR DLDSLKDKLQ GVVAKAIRNV AEEGIEKKDI TTWSFGDLPK
QYQKRKGNYE VKAYPALIDE KDQVSIKLFD DEFEAERQHR IGLRRLLLIN IPSPVKHLQK
ALPNKAKLAM YFNPFGQVQL LIDDIISASV QQLLDEKKLD VRNEAQFEQA KDWVRQELND
YAEQISLQVE QILTIYQRIK KRLKGKISLD IAFAMSDINT QLDKLVFKGF VEHCGWSRLT
DVARYLKAIE NRLDKLPVDP TRDRLHMQSI SKVQDLLNAQ LAKVPKTQPV PEVLVEARWM
IEEFRVSCFA QVLGTAYPIS EKRIVVQISQ V
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