ID A0A0Q0HDP5_9GAMM Unreviewed; 284 AA.
AC A0A0Q0HDP5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Putative HTH-type transcriptional regulator YbbH {ECO:0000313|EMBL:KPZ71535.1};
GN Name=ybbH {ECO:0000313|EMBL:KPZ71535.1};
GN ORFNames=AN944_01547 {ECO:0000313|EMBL:KPZ71535.1};
OS Shewanella sp. P1-14-1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=1723761 {ECO:0000313|EMBL:KPZ71535.1, ECO:0000313|Proteomes:UP000050414};
RN [1] {ECO:0000313|EMBL:KPZ71535.1, ECO:0000313|Proteomes:UP000050414}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P1-14-1 {ECO:0000313|EMBL:KPZ71535.1,
RC ECO:0000313|Proteomes:UP000050414};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPZ71535.1}.
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DR EMBL; LKTL01000008; KPZ71535.1; -; Genomic_DNA.
DR RefSeq; WP_055024005.1; NZ_LKTL01000008.1.
DR AlphaFoldDB; A0A0Q0HDP5; -.
DR PATRIC; fig|1723761.3.peg.1580; -.
DR Proteomes; UP000050414; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR HEXR-RELATED; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000050414}.
FT DOMAIN 1..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 121..260
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 284 AA; 31365 MW; E15879A843DB702C CRC64;
MNTLEKVQKS LTQFSKSERK VAEVILASPQ TAIHSSIATL AKMADVSEPT VNRFCRRLDT
KGFPDFKLHL AQSLANGTPY VSRHVEEDDS PESYTTKIFE SSMASLDTAR QSLDVVAVNK
AVDILTQAKT ISFFGLGASS SVAHDAQNKF FRFNVPVICF DDVLMQRMSC IGCNEGDVVV
LISHTGRTKS LIEIARIARE NGAAVIGITA RNSPLSHECT LPVTMEVPED TDMYLPMASR
LAQLVTIDVL ATGFTLRRGP RFRDNLKRVK EVLKESRVNK DLTI
//
