ID A0A0Q3GB96_BRADI Unreviewed; 876 AA.
AC A0A0Q3GB96;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100844575 {ECO:0000313|EnsemblPlants:KQK08656};
GN ORFNames=BRADI_2g43077v3 {ECO:0000313|EMBL:KQK08656.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK08656.1};
RN [1] {ECO:0000313|EMBL:KQK08656.1, ECO:0000313|EnsemblPlants:KQK08656}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK08656.1,
RC ECO:0000313|EnsemblPlants:KQK08656};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK08656.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK08656.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK08656}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK08656};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000881; KQK08656.1; -; Genomic_DNA.
DR RefSeq; XP_003569328.1; XM_003569280.3.
DR AlphaFoldDB; A0A0Q3GB96; -.
DR EnsemblPlants; KQK08656; KQK08656; BRADI_2g43077v3.
DR GeneID; 100844575; -.
DR Gramene; KQK08656; KQK08656; BRADI_2g43077v3.
DR KEGG; bdi:100844575; -.
DR OrthoDB; 1410379at2759; -.
DR Proteomes; UP000008810; Chromosome 2.
DR ExpressionAtlas; A0A0Q3GB96; baseline.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR45093:SF4; OS01G0607400 PROTEIN; 1.
DR PANTHER; PTHR45093; TRANSCRIPTION ACTIVATOR MSS11; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 4.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 587..618
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 629..670
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 672..714
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 844..876
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 124..160
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 362..511
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..384
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 398..442
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 473..511
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 876 AA; 96064 MW; 0D7B94980ABA1618 CRC64;
MSQTNWEADK MLDVYIYDYF MKRNLQATAK AFQAEGNVSS DPVAIDAPGG FLFEWWSVFW
DIFIARTNEK HSDVAASYIE TQLVKAREQQ QQQLLPQQRQ QQPQHIQMQQ MLVQRAAQQQ
LQQQQHQQQQ QQQQQQQRRD GSHLLNGTSS GLSGNNPLMR QNQSTANVMA TKMYEERLKL
PSQRESSDEA SIKQRYGENA GQLLESNETS LLKAAASGQS SGQILHGTIG GLPGTMQQIQ
ARSPQLPGLA QSIKTEMNPI LTPRAAGPEG SFMGLQGSNQ AGNNLTLKGW PLTGLEQLRS
GILQQKSFLQ NQHQLQQQIQ FLTPQQQQQL AFQAQQNMAS PTSSDVDSRR LRMMFNNRNI
VLGRDGQTTS GGDIIPNIGS PSQSGGDIDM LIKKKIAHAH QQQQQQQQQL LQQQSNSQQQ
QHQAVSSQQS HSSNQLLQQE KPGTGNMPVD GGMPNSFAVT EQTTKKRKKP GSSSGRANSS
GTANTAGPSP SSAPSTPSTH TPGDAMPVPQ LQQNGVSAKP LVMFGSDGTG SLTSTANPLG
DVDRLLEEGL DENVESFLSQ DDMDPRDSLG RSMDASKGFG FAEIAKARAS ASKVVCCHFS
SDGKLLATGG HDKKVVLWCT EPLKPKSSLD EHSFLITDVR FSPSMSRLAT SSFDKTVRVW
DADNTDYSLR TFTGHSASVM SLDFHPNKED IICSCDSDGE VRSWSINNGS CLTCVKVFKG
GATQMRFQPR KGKYLAAASE KAIYILDGET QNACRSPLQG HTKNIQSVCW DSVGDYLASV
SEDAVRIWSF ASGHDGEFMH ELNCSGNKFQ TCVFHPAYPS LLVIGCYESL ELWDIREKNA
MTLNNAHDGL IAALAASSAT GKVASVSHDR LVKLWK
//
