ID A0A0Q3JLR1_BRADI Unreviewed; 575 AA.
AC A0A0Q3JLR1;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=BRADI_1g07492v3 {ECO:0000313|EMBL:KQK13020.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK13020.1};
RN [1] {ECO:0000313|EMBL:KQK13020.1, ECO:0000313|EnsemblPlants:KQK13020}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK13020.1,
RC ECO:0000313|EnsemblPlants:KQK13020};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK13020.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK13020.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK13020}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK13020};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000880; KQK13020.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0Q3JLR1; -.
DR STRING; 15368.A0A0Q3JLR1; -.
DR EnsemblPlants; KQK13020; KQK13020; BRADI_1g07492v3.
DR Gramene; KQK13020; KQK13020; BRADI_1g07492v3.
DR InParanoid; A0A0Q3JLR1; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR044653; AZF1/2/3-like.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45988:SF97; C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY; 1.
DR PANTHER; PTHR45988; C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED; 1.
DR Pfam; PF13912; zf-C2H2_6; 3.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 79..101
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 385..412
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 493..515
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 105..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 552..575
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 575 AA; 59461 MW; 48E32AE929DDE528 CRC64;
MDARAYYLQA AEAAATVTTQ AAARATAGGE VAARTFYFQA RQGRAAGDDA PPPPPRHGQS
LSIINGGGAA AEGADLRDLI CPECDKVFPS DKAMYGHLRS HPEKGYKGAT RPAPNPTAGS
VAGAGDAKKR RRKVARRKNR AAASGLSIKW PVTAKRGRLP LAPTAGAGSA ASSSSSVSTA
VLESSFSFCS QEVEAAMILL QLSGFRGGGG EPEEELPVAV SQSQIVLQAA DQLELVPADH
VQNVAMLDAP EVEKQPVMPD HVSVSDAGAW LPMMPGHGSA GAALWEADKS VPPVAVEHMF
GIITESSASL AAAIEQAKVA AASSPEARDK KLGKLVVSDA KKPMKKRRLL HDIEIQAAHS
SEPAEAADAM TRARRIPSPA SDRSFVCPRC DKQFPTYQAL GGHMASHNRA NKYGPDGQQH
RQLVAQLAVQ SLMASQGGAN AIPRANAAIA SGNTATTGGT NAAAADASSG LGLQIILPPP
PTAPIRLAPP AAYQCSRCEL VFRTGQALGG HKRRHWIADK VRAEADATRA AIVAAAAEAV
AAATPAVAAE AAVSAPAAPR GDPRDFDLNE MPSEE
//
