ID A0A0Q3UT76_AMAAE Unreviewed; 976 AA.
AC A0A0Q3UT76;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=SWI/SNF complex subunit SMARCC1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=AAES_68955 {ECO:0000313|EMBL:KQK82978.1};
OS Amazona aestiva (Blue-fronted Amazon parrot).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Amazona.
OX NCBI_TaxID=12930 {ECO:0000313|EMBL:KQK82978.1, ECO:0000313|Proteomes:UP000051836};
RN [1] {ECO:0000313|EMBL:KQK82978.1, ECO:0000313|Proteomes:UP000051836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FVVF132 {ECO:0000313|EMBL:KQK82978.1};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQK82978.1}.
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DR EMBL; LMAW01001669; KQK82978.1; -; Genomic_DNA.
DR STRING; 12930.A0A0Q3UT76; -.
DR Proteomes; UP000051836; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007399; P:nervous system development; IEA:InterPro.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR042382; CSPG5.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR009505; Neural_ProG_Cyt.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR032451; SMARCC_C.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR032448; SWIRM-assoc.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR15381:SF1; CHONDROITIN SULFATE PROTEOGLYCAN 5; 1.
DR PANTHER; PTHR15381; CHONDROITIN SULFATE PROTEOGLYCAN 5 -RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF06567; Neural_ProG_Cyt; 2.
DR Pfam; PF04433; SWIRM; 1.
DR Pfam; PF16495; SWIRM-assoc_1; 1.
DR Pfam; PF16498; SWIRM-assoc_3; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
DR PROSITE; PS50934; SWIRM; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000051836};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 855..880
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 69..166
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT DOMAIN 238..289
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT DOMAIN 243..285
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 371..476
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 587..629
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 642..712
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 730..798
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 909..976
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 390..476
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 594..613
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 736..760
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 922..948
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 949..976
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 976 AA; 108078 MW; BEA956547AD3E2DA CRC64;
MSFTLAFXVN PKKDSENTPV KGGTVADLDE QDEETVATGG KEDEDPNKGD QSRSIDPGED
NVTEQTNHII IPSYASWFDY NCIHVIERRA LPEFFNGKNK SKTPEIYLAY RNFMIDTYRL
NPQXYLTSTA CXRNLTGDVC AVMRVHAFLE QWGLINYQVD PESRPMAMGP PPTPHFNVLA
DTPSGLMPLH IRTPQVPAAQ QMLSFPEKNK EKPTDLQNFG LRTDIYSKKT LAKSKGASAG
REWTEQETLL LLEALEMYKD DWNKVSEHVG SRTQDECILH FLRLPIEDPY LENSDASLGP
LAYQPVPFSQ SGNPVMSTVA FLASVVDPRV ASAAAKAALE EFSRVREEVP LELVEAHVKK
VQEAARASGK VDPTYGLESS CIAGTGPDEP EKIDGAEEEK METETDGQQP EKVENKAENE
VEEGDKVQEG ENERNTEKEQ DSEVTADTKP EEKEAEENKE NVDASKDKEN EAGKKKVEHE
ISEGNVATAA AAALASAATK AKHLAAVXER KIKSLVALLV ETQMKKLEIK LRHFEELETI
MDREKEAAAA EEAENLGYCN QKQATEGIQE LEFSFWEKAR VKMQTNANWT GRSDSRTRFD
DTRTTHARPD DAKXGSQHPS SWRWSPPTWH VTNDRKSXWT SCSSSSSEWH VTGPAEDGQA
AVTWPGDGAS LGTDSAESDL LLVAAGSAAP RTPEPVTATP LPAEPPADRT ASEIIDVDYY
DLFEGADFYP TTSFYADGDE EDELEEDEEE EEEEEDGGLE DENGYRPPAS AMPGGSPTAW
PRPGERGQPE NGTEXRSGYV RHNSSCRSVC DLVPSYCHNG GQCYLVESHG AFCRCNTQDY
TWHKGTRCEA IVTDFQVMCV AVGSAALVVL LLFMLTVFFA KKLYLLKTEN SKLRKTKYRT
PSELHNDNFS LSTIAEGSHP NDDPSAPHKL QDSLKSCLKD EEPFNIHNST SPKHDGSSGK
GEQDSSELNC LQNNLT
//