ID A0A0Q4FPY2_9SPHN Unreviewed; 469 AA.
AC A0A0Q4FPY2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Type-4 uracil-DNA glycosylase {ECO:0000256|ARBA:ARBA00019403};
GN ORFNames=ASE75_14065 {ECO:0000313|EMBL:KQM62742.1};
OS Sphingomonas sp. Leaf17.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=1735683 {ECO:0000313|EMBL:KQM62742.1, ECO:0000313|Proteomes:UP000051777};
RN [1] {ECO:0000313|EMBL:KQM62742.1, ECO:0000313|Proteomes:UP000051777}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf17 {ECO:0000313|EMBL:KQM62742.1,
RC ECO:0000313|Proteomes:UP000051777};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQM62742.1, ECO:0000313|Proteomes:UP000051777}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf17 {ECO:0000313|EMBL:KQM62742.1,
RC ECO:0000313|Proteomes:UP000051777};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the uracil-DNA glycosylase (UDG) superfamily.
CC Type 4 (UDGa) family. {ECO:0000256|ARBA:ARBA00006521}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQM62742.1}.
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DR EMBL; LMKL01000009; KQM62742.1; -; Genomic_DNA.
DR RefSeq; WP_055934750.1; NZ_LMKL01000009.1.
DR AlphaFoldDB; A0A0Q4FPY2; -.
DR STRING; 1735683.ASE75_14065; -.
DR OrthoDB; 5290748at2; -.
DR Proteomes; UP000051777; Unassembled WGS sequence.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004844; F:uracil DNA N-glycosylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006281; P:DNA repair; IEA:UniProt.
DR CDD; cd10030; UDG-F4_TTUDGA_SPO1dp_like; 1.
DR Gene3D; 3.40.470.10; Uracil-DNA glycosylase-like domain; 1.
DR InterPro; IPR023875; DNA_repair_put.
DR InterPro; IPR025404; DUF4130.
DR InterPro; IPR005273; Ura-DNA_glyco_family4.
DR InterPro; IPR005122; Uracil-DNA_glycosylase-like.
DR InterPro; IPR036895; Uracil-DNA_glycosylase-like_sf.
DR NCBIfam; TIGR03915; SAM_7_link_chp; 1.
DR NCBIfam; TIGR00758; UDG_fam4; 1.
DR NCBIfam; TIGR03914; UDG_fam_dom; 1.
DR PANTHER; PTHR33693; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR PANTHER; PTHR33693:SF3; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR Pfam; PF13566; DUF4130; 1.
DR Pfam; PF03167; UDG; 1.
DR SMART; SM00986; UDG; 1.
DR SMART; SM00987; UreE_C; 1.
DR SUPFAM; SSF52141; Uracil-DNA glycosylase-like; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000051777}.
FT DOMAIN 302..462
FT /note="Uracil-DNA glycosylase-like"
FT /evidence="ECO:0000259|SMART:SM00986"
SQ SEQUENCE 469 AA; 51118 MW; 5A5073E77BDB36AF CRC64;
MQVVTLDRPD DFDGWRAAAR RLVLAGVAPD AVTWQVGSEG GDLFALTGDT PLAGSDAPEA
GGDTPAFSVP RAFVDIAGKA ALSSDPARFA LLYTLLHRLR TTPKLMEDHA DPLVRWVDLL
AKDVRRDIHK MRAFVRFREV TDDDGARFVA WFEPDHHIVR ANATFFVNRF ASMRWSILTP
ELSIHWDGTT LVEGPPATRA DAPDGDPTEA VWKTYYASTF NPARVKIGAM LKEMPRKYWK
NMPETALVPG LLAAAQARES GMIARARDTV GGNSMIAWEA LRDEATGCTR CPLYQPATQT
VFGEGPVDAA LMFVGEQPGD QEDLAGRPFV GPAGQVFDRA MAAAGIDRAT AYVTNAVKHF
KFEPRGKRRI HAKPDTGEID ACRWWVDQER LLIRPKVTVA LGATAARSLT GKTVTISRER
GRPLTLADGG TAFITVHPSY ILRIPDAAAA DAEFARFVED LKLAAGAVG
//
