ID   A0A0Q4LHU5_9SPHI        Unreviewed;      1045 AA.
AC   A0A0Q4LHU5;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   SubName: Full=Restriction endonuclease subunit R {ECO:0000313|EMBL:KQN34286.1};
GN   ORFNames=ASE92_11790 {ECO:0000313|EMBL:KQN34286.1};
OS   Pedobacter sp. Leaf41.
OC   Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Pedobacter.
OX   NCBI_TaxID=1736218 {ECO:0000313|EMBL:KQN34286.1, ECO:0000313|Proteomes:UP000051488};
RN   [1] {ECO:0000313|Proteomes:UP000051488}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Leaf41 {ECO:0000313|Proteomes:UP000051488};
RA   Garrido-Oter R., Mueller D.B.;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000051488}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Leaf41 {ECO:0000313|Proteomes:UP000051488};
RA   Vorholt J.;
RT   "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL   Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KQN34286.1}.
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DR   EMBL; LMLE01000008; KQN34286.1; -; Genomic_DNA.
DR   RefSeq; WP_056850444.1; NZ_LMLE01000008.1.
DR   AlphaFoldDB; A0A0Q4LHU5; -.
DR   STRING; 1736218.ASE92_11790; -.
DR   OrthoDB; 9759819at2; -.
DR   Proteomes; UP000051488; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR   CDD; cd18032; DEXHc_RE_I_III_res; 1.
DR   CDD; cd09203; PLDc_N_DEXD_b1; 1.
DR   CDD; cd18799; SF2_C_EcoAI-like; 1.
DR   Gene3D; 3.30.870.10; Endonuclease Chain A; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR021835; DUF3427.
DR   InterPro; IPR006935; Helicase/UvrB_N.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR025202; PLD-like_dom.
DR   PANTHER; PTHR47962; ATP-DEPENDENT HELICASE LHR-RELATED-RELATED; 1.
DR   PANTHER; PTHR47962:SF7; MITOCHONDRIAL ATP-DEPENDENT HELICASE IRC3-RELATED; 1.
DR   Pfam; PF11907; DUF3427; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF13091; PLDc_2; 1.
DR   Pfam; PF04851; ResIII; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF56024; Phospholipase D/nuclease; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   Endonuclease {ECO:0000313|EMBL:KQN34286.1};
KW   Hydrolase {ECO:0000313|EMBL:KQN34286.1};
KW   Nuclease {ECO:0000313|EMBL:KQN34286.1}.
FT   DOMAIN          332..487
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          546..699
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
SQ   SEQUENCE   1045 AA;  120091 MW;  152E0BD0E00CEED3 CRC64;
     MNLGIYEQLI TGVLKAKLDS LDRQSFYINT APIDKEEASR ILAQHLSSAM QQAFSLIKKD
     VTKQIEIANK IIVLLQQEIA QYDFKEDIID AEATILRAVF TTIDNHYSDL DLRLKEITPQ
     TRLTQSELFT GGNVGLSLES ELKKEIASAN RIDLLVSFIK WKAIVILKSA FEDFTANGGQ
     LRVITTTYMG ATDAKAIREL AKLPNTEIKV SYNVDKERLH AKAYLFYRDS GFHTGYIGSS
     NFSRSALTDG LEWNVKITTK EIPHIIAKFQ KTFESYWQHA EFELYDDQRH YEKLSGAIKN
     NRIGKAEEGI INFFDIKPYH YQLEVLEKLQ VERHIHGRFK NLIVAATGTG KTMISAFDFK
     RFRQQNPQST FLFIAHRKEI LTQARHTFRN ILRDSSFAEL WVDGLEITDK RHVFASVQTL
     NNQLEAMKVR PEYYDYIIID EGHHATANSY RKALSYFRPQ ILLGLTATPE RMDGQSILPY
     FDNHIAAEIR LPEALNQKLL TPFQYFAIAD STDLSQVRWE KGRYVASELS KVYTANHRRV
     GEIIRNLEQY TKDFEDLIAI GFCVTKDHAL FMSERFNKAG LKSKALTSDT SSEERSLALM
     QLRTKQINYL FVVDILNEGI DIPEIDTLLF LRPTESLTIF LQQLGRGLRL HDGKDVLTVL
     DFVGNANAEY DFEGKFRALI GKTNTTIQKE IENDFPHLPL GCAIVLEKQA KETILANIKR
     ATNLSRKNLI HKIRAYAQHT NLPLTLANFL HIYNLDINLI YARNSWSKLC DEAGVIADYN
     PLNEKLYTAM LKNKWLSTSS HSYFSFLLNL AKANFVISDK QFSETEKLML VMLHYDFWQK
     PTDSSLIESI EEIGRNRIYV AEIISFLTYR LAQTDFEEYD LTNLSYAQPL KLHARYTREQ
     VLVAFRLSTL ASQSSNREGV AENKDLNTEL LFIDLTKSEE DFSPTTLYDD YAINEILFHW
     QSQNQTRSDS GKGLTYINHQ KLGKKILLFV REAKSNQYGN TQGYVFVGDA NFIKYEGSKP
     MSITWELQEP IPNYLWKDSA KLVSG
//